Gene Synpcc7942_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1597 
SymbolfolE 
ID3775021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand+ 
Start bp1663657 
End bp1664298 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID637800030 
ProductGTP cyclohydrolase I 
Protein accessionYP_400614 
Protein GI81300406 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.874876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.473501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC CCTCCTTGAA TGGCAGCAAC AGCTTGGTTG ATGCGATCCG CCCTGAGACG 
GAGGCTGTTT CCCAAGCCGA GATGGAAGCA GCAGTCCGCA CGTTGCTGCT CGGGGTCGGA 
GAAGATCCAG AGCGGGAAGG GCTCCTGAAA ACCCCGAAAC GGGTCGCTGA GGCCTATCGC 
TTTTTGACCA GCGGCTACAG CCAATCCCTG GATGACTTGG TCAACGGCGC CATCTTCGAC 
GAAGGTCACA ACGAAATGGT GTTGGTGCGT GACATCACCG CCTTCAGCCT TTGTGAACAC 
CACATGCTGC CGTTCATGGG CAAAGTTCAC GTCGCTTACA TCCCCAACCA AAAGGTTGTC 
GGCCTGAGCA AACTGGCTCG CATCGTCGAG ATGTACAGTC GCCGTCTGCA GGTGCAAGAG 
CGCCTGACCC GCCAGATTGC TGAGTCGGTG CAGGAAATCC TCGACCCGCA AGGTGTGGCC 
GTCGTCATGG AAGCCACCCA CATGTGCATG GTGATGCGCG GTGTCCAAAA GCCGGGCTCT 
TGGACCGTGA CCAGCGCCAT GGTCGGTGTT TTCCAAGAGG ATCAACGCAC CCGCGAGGAA 
TTCCTCAGCC TGATTCGCCA TCAACCTGCC GCATTTGCCT AA
 
Protein sequence
MTSPSLNGSN SLVDAIRPET EAVSQAEMEA AVRTLLLGVG EDPEREGLLK TPKRVAEAYR 
FLTSGYSQSL DDLVNGAIFD EGHNEMVLVR DITAFSLCEH HMLPFMGKVH VAYIPNQKVV 
GLSKLARIVE MYSRRLQVQE RLTRQIAESV QEILDPQGVA VVMEATHMCM VMRGVQKPGS 
WTVTSAMVGV FQEDQRTREE FLSLIRHQPA AFA