Gene Synpcc7942_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1590 
Symbol 
ID3775014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1657274 
End bp1658131 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID637800023 
Producthypothetical protein 
Protein accessionYP_400607 
Protein GI81300399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.846445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.767119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TTTGGGAACT CGATTTTTAC TCGCGGCCGA TCCTTGATGA GGCAGGCAAA 
AAGCTTTGGG AAGTGGCGAT CGCGGAAACC GTGACCACTG TTGAGGCTCC CGCCGTGACT
TTTCGCTATG CCGACTTTGT CACCGGCGAT CAGGTCAACT CGGTGACGCT GCAGGATGCC
TTGAAAAGCG CGATCGCCGA AGCAGGCACG CCCCCCGATC GGATTCGCTA CTTCCGGCGG
CCGATGAACA ACATGATTCG CAAGGCCTGC ACGGATCTGG GGCTCCCCTG TCAGCTCAGT
CGCCGAACCG TCAGTCTCCA CAACTGGCTG GAAGAGCGGC GACAGCAGGT CTATGCGACG
CATCCCGGCT ACAACCCTGG CCCAGTTGCA GGGGTTCAGA TGCCCGACGA AGCCCCCCAG
CCCTTGCCTG ATGCCCTGCG GGGCGATCGC TGGGCCTTTG TCGATTTGCC CTTCGCGGCA
CTGGCGGAGC ATGGGGAATG GGGGATCGAT TTTGGGGAAG CTTTCCCGCT GGCTGGGATT
GATTTGCCCG ACGAGACACC GATTCCTGGC CTGATCATCT TTGCAAGTCG CGCCATGCCG
ATCGCCGCTT GGCTTTCGGG ACTGGAACCG GCTTGGCTAA CCTACGATTC GCCAGCCAAA
CAACTGCTCT TGGAAACGGG TGGCAGTGAG CGCTGGACTT TAGCAGCACT GAACGTCCCA
GCCCTTCAGC AGGAAGCGAC TCAGTTTAAC GCTGCGAAAC AGGCGGCAAA GGGACTGCAC
TTCTTGGCCG TGCAAGTCGA TCCCAACAGC GATCGCTTTG CCGGTTTCTG GTTGCTGCGC
GAGTTGCCGC TAGGGTAG
 
Protein sequence
MTRIWELDFY SRPILDEAGK KLWEVAIAET VTTVEAPAVT FRYADFVTGD QVNSVTLQDA 
LKSAIAEAGT PPDRIRYFRR PMNNMIRKAC TDLGLPCQLS RRTVSLHNWL EERRQQVYAT
HPGYNPGPVA GVQMPDEAPQ PLPDALRGDR WAFVDLPFAA LAEHGEWGID FGEAFPLAGI
DLPDETPIPG LIIFASRAMP IAAWLSGLEP AWLTYDSPAK QLLLETGGSE RWTLAALNVP
ALQQEATQFN AAKQAAKGLH FLAVQVDPNS DRFAGFWLLR ELPLG