| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1581 |
|---|
| Symbol | |
|---|
| ID | 3775005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1645142 |
|---|
| End bp | 1646821 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637800014 |
|---|
| Product | peptidase M14, carboxypeptidase A |
|---|
| Protein accession | YP_400598 |
|---|
| Protein GI | 81300390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACT TTGCTTGCGA TCGCTTCTAT CGCTATGACG AGCTGACTCA ACTCCTGCAG
GATTGTGCAG CTGCCTACCC TCAATTGCTG AAGTTGGAGT CTTTAGGCAA AAGCCATGAA
GGACGAGAGC TTTGGCTGCT GCGAATCACG GACTACAGCA AAGGCGATGA TACGGAGAAA
CCAGCCCTCT GGATTGATGG CAATATTCAC GCCACCGAGC TAGCAGCTTC TAGTGCATGT
CTGCACTTTT TGCAGGTGTT GTTGCGAGGA TTTGAGCAAG GTAATCCGGT CGTTCAACGC
TGTCTACAAC GCTGCACCAT TTATTTATGT CCGCGCCAAA ATCCTGATGG TGCTGAGTTA
GCCCTCGCCG ATCAGCCTCA GTTTCTGCGA TCGAGTACGA GACCCTATCC CTTGCGCGAT
CGCGATTCTA GTGGCTTGCA AGAAGCCGAT ATTGATGGTG ATGGCCGCAT TCTGTTGATG
CGCATTCCCG ATCCGCATGG GGCTTGGAAA GTCCATCCGC AGGAACCACG CCTATTGGTT
CGTCGCGATC CAGTTGAGAC TGGAGGTCAG TACTATCGAG TGCTGCCAGA AGGATTGATT
CAAGACTACG ACGGCGATTT AATTCCCTTG CAACCCCGTC AGCAGGGCTT AGATCTCAAT
CGCAATTACC CGATCGATTG GCGACCGGAG CATGAGCAAC TGGGAGCAGG ACCTTTCCCC
GCTTCGGAAC CAGAAGTACA AGCTGTCGTC AAATTTTTGA GCGATCGCAC CAATCTATTC
GCAGCGATTT CTTTCCATAC ATTTAGTGGT GTATTACTGC GTCCCTACAG TCATAAACCA
GATGATACTT TCCCGGTTGC AGATCTGCGG GCTTATGAAG TGATTGGCAA AGCGGGTGAA
GAACAAACCG GCTATCCGGC GATCGGGGTT TATGATAACT TCCGCTATCA TCCCAAGGAG
ATTACGACTG GCGTTTTTGA TGACTGGGCC TACGATCATC TAGGGCTATT TGCTTGGACA
GTCGAGATTT GGAGCCCGCA GAAGGCCGCT GGTATCGAAA AATATGACTG GATTGATTGG
TTCCGTGAGC ATCCAGTTGA AGACGACTTA AAGTTCCTAG AGTGGAACGA TCGCGAGTTA
GAAGGCAAAG GCTTTATTGA CTGGTATCCC TTTGAGCATC CGCAGTTAGG ACCGCTGGAA
CTCGGCGGTT GGGATGACTT GCACACTTGG CGCAATCCGC CCCAAAAGTT TCTGCAAGCC
GAACTCGATC GCTTTCCGCA ATGGTTGCTC TGGCAGCTCC AAATTGCGCC GCAGCTCGAA
GTGATTAGGG CTGAAGTTCA AGCCTTGGGT GATCGCCTCT ATAAAGTCAA GTTCGTGTTA
CAAAATAGTG GTTGGTTGCC AACTTACATC AGTCAAAAGG CTCTGGAGCG GCATTTAGTT
GATCCGCTCG TTGCAGAACT CCAGCTTCCC GAGGGTATCG AACTCTGCCA AGGTAAAGCA
CGGCAAGAGC TAGGGCAATT GGAAGGGCGA TCGCAAAAAG GCGTGATGCC CGAGGCCGAT
CCCACCAGCG ATCGCGCTAA AGCAGAGTGG ATTATTCGGG GCGATCGCGG TCAAGTGATC
ACGATCGAAG CTCGTCACCC GCGCGCAGGT AAATTGCAGC AACAACTGAC CTTGAACTGA
|
|---|
| Protein sequence | MLNFACDRFY RYDELTQLLQ DCAAAYPQLL KLESLGKSHE GRELWLLRIT DYSKGDDTEK
PALWIDGNIH ATELAASSAC LHFLQVLLRG FEQGNPVVQR CLQRCTIYLC PRQNPDGAEL
ALADQPQFLR SSTRPYPLRD RDSSGLQEAD IDGDGRILLM RIPDPHGAWK VHPQEPRLLV
RRDPVETGGQ YYRVLPEGLI QDYDGDLIPL QPRQQGLDLN RNYPIDWRPE HEQLGAGPFP
ASEPEVQAVV KFLSDRTNLF AAISFHTFSG VLLRPYSHKP DDTFPVADLR AYEVIGKAGE
EQTGYPAIGV YDNFRYHPKE ITTGVFDDWA YDHLGLFAWT VEIWSPQKAA GIEKYDWIDW
FREHPVEDDL KFLEWNDREL EGKGFIDWYP FEHPQLGPLE LGGWDDLHTW RNPPQKFLQA
ELDRFPQWLL WQLQIAPQLE VIRAEVQALG DRLYKVKFVL QNSGWLPTYI SQKALERHLV
DPLVAELQLP EGIELCQGKA RQELGQLEGR SQKGVMPEAD PTSDRAKAEW IIRGDRGQVI
TIEARHPRAG KLQQQLTLN
|
|---|
| |