Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1541 |
Symbol | |
ID | 3774965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1598656 |
End bp | 1599168 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637799974 |
Product | flavodoxin FldA |
Protein accession | YP_400558 |
Protein GI | 81300350 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | [TIGR01752] flavodoxin, long chain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.325329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0252615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAA TTGGCTTATT CTACGGAACT CAAACAGGCG TTACCCAAAC TATTGCTGAA TCGATTCAAC AAGAGTTTGG CGGTGAAAGT ATTGTTGACC TCAATGATAT TGCGAATGCT GATGCCAGTG ATTTAAATGC CTATGATTAT TTAATTATCG GTTGTCCTAC TTGGAATGTT GGTGAACTGC AAAGTGACTG GGAAGGAATC TATGATGATT TAGACTCAGT CAACTTTCAA GGGAAGAAAG TTGCCTACTT TGGAGCGGGT GATCAAGTAG GCTATTCCGA TAACTTTCAG GATGCTATGG GCATTCTAGA AGAAAAAATT AGCTCTTTAG GTAGTCAAAC AGTTGGCTAT TGGCCTATTG AAGGCTATGA CTTCAATGAG TCAAAAGCTG TACGCAATAA TCAGTTTGTT GGTTTAGCAA TTGATGAAGA CAATCAACCT GATCTCACAA AGAATCGAAT TAAGACTTGG GTCAGCCAGC TAAAGTCAGA GTTCGGTCTT TAA
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Protein sequence | MAKIGLFYGT QTGVTQTIAE SIQQEFGGES IVDLNDIANA DASDLNAYDY LIIGCPTWNV GELQSDWEGI YDDLDSVNFQ GKKVAYFGAG DQVGYSDNFQ DAMGILEEKI SSLGSQTVGY WPIEGYDFNE SKAVRNNQFV GLAIDEDNQP DLTKNRIKTW VSQLKSEFGL
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