Gene Synpcc7942_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1539 
Symbol 
ID3774963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1597516 
End bp1597818 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content45% 
IMG OID637799972 
Producthypothetical protein 
Protein accessionYP_400556 
Protein GI81300348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.453632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0148793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA TCATCATTAA CTCAGTTTGC CCCATTTGCA TTTGGCTAGT TCTAACACTC 
TTTTTCTTAT CTGTTTTATG TGCCTTACAG GATGGAGCAG CACAGCTAAA ACGATTGCAT
CAAGTTCCCT GTAACCGATG TGCCTTTTCC ACCGGCGACC ACAGGCTTAA GTGCACTGTT
CGCCCTTGCC AAGCATTCTC TGAAGAAGCT ATCTGCTGCA TTGACTTTGA ACCGGTCAGT
ATCAAGCCAG CTCATTTATG GCTTATACAG TCTCTTCAGG TCTCCAAGCT AGGTAGGTCT
TAG
 
Protein sequence
MNQIIINSVC PICIWLVLTL FFLSVLCALQ DGAAQLKRLH QVPCNRCAFS TGDHRLKCTV 
RPCQAFSEEA ICCIDFEPVS IKPAHLWLIQ SLQVSKLGRS