Gene Synpcc7942_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1531 
Symbol 
ID3774955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1590799 
End bp1591614 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content49% 
IMG OID637799964 
Productmolybdenum ABC transporter, periplasmic molybdate-binding protein 
Protein accessionYP_400548 
Protein GI81300340 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0160343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCTC AGCGCTGGCG ATATGGTCTG CTTGCGGGAC TTGTAGCGAT CGCCTGCACC 
ATTGGATTTC CACCCTTTTT GTCCCTCCTT GCCCCTCAGT TATCTCCGCC TGCGAAGGGG
TCGGAACTCC TTGTGGCGGC AGCGGCTAGT TTGCAAAATC CCTTGCAGGA GATTACGACA
CTCGAGTCTG TCGATGCTCC CAAAATGACA GTTCGCTACA CCTTTGCAGC CTCTGGAGCA
CTACAGCGAC AGATTGAACA AGGCGCACCG ATTGATGTCT TTATTTCTGC TGCCCAAAAG
CCTATGCAGC TTCTGCAAAA ACAAGGCTTA GTTTTACCAG AGACTCAAAC AGAACTGCTC
ACGAATCAAC TGGTTTTAAT TGTTCCTAAG ATTGCCGATA GCAATATCAC GTCTTTTCAA
GACCTCTTAA AACCGACTAT TCAGCGCCTT GCGATTGGCG AGCCTCGGAG TGTTCCTGCT
GGCCAGTATG CGATTGAAGT CTTGCAAAAC CTTGGCATTC TTGATCAACT GCAGTCCAAG
CTTGTACTCA GCAATAATGT CAAAGCAGTG TTGACAGCCG TTGAGACCGG TAACGTTGAT
GCTGGGATTG TTTATCTCAC GGATGCACAA GGCTCTAATC AAGTCATTGT GACTTGCACG
GCAGACCCAG AGCTACACTC GCATATCATT TACCCTGTTG CAGTCCTTCG ATCGAGTCAA
TCCATTCCTC AAGCCAAGCA ATACCTCAAA TTCCTCAAGG GTGAGCTTGC GCAGGCAGTT
TTTAAACGCT ACGGATTTGG AGTCCCAGCT GCTTGA
 
Protein sequence
MGAQRWRYGL LAGLVAIACT IGFPPFLSLL APQLSPPAKG SELLVAAAAS LQNPLQEITT 
LESVDAPKMT VRYTFAASGA LQRQIEQGAP IDVFISAAQK PMQLLQKQGL VLPETQTELL
TNQLVLIVPK IADSNITSFQ DLLKPTIQRL AIGEPRSVPA GQYAIEVLQN LGILDQLQSK
LVLSNNVKAV LTAVETGNVD AGIVYLTDAQ GSNQVIVTCT ADPELHSHII YPVAVLRSSQ
SIPQAKQYLK FLKGELAQAV FKRYGFGVPA A