| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1501 |
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| Symbol | |
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| ID | 3773674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1550078 |
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| End bp | 1551718 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799934 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_400518 |
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| Protein GI | 81300310 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGC GAATCTGCGG ATCGTCCATT CCTGTCGCTC GTTGGCTCAC CATGCCCAAG
GTTCTGGTCT CCGACCCCAT CGATCAGGTC GGTCTCGACA TTCTCTCGCA AGTCGCTCAG
GTAGACGTCA AGACGGGATT GTCGCCGTCC GAACTGGCGC AAATCATTGG CGAATACGAT
GCGCTGATGC TGCGATCGGG CACTCGTGTC ACCGCAGAAG TGATTGAGGC CGGTCAAAAG
CTACGGATCA TTGGTCGGGC TGGAGTTGGG GTCGATAACG TCGATGTTCC AGCGGCAACG
CGGCGCGGCA TCGTTGTGGT CAACTCGCCG GAAGGCAACA CGATTGCAGC AGCCGAACAT
ACGCTGGCGA TGATGCTGTC GCTGTCGCGG CATATTCCCG ATGCCAACGC TTCGACTAAA
TCGGGCGGCT GGGATCGCAA GAGCTTTGTC GGCACTGAAG TCTACAAGAA AACCCTCGGT
GTCGTTGGCT TGGGTAAAAT CGGCTCCCAC GTCGCCACGG TCGCCAAGGC GATGGGCATG
AAATTGCTCG CCTACGATCC CTTCATTTCA GCTGAGCGAG CTGAGCAAAT TGGTGCTCGG
TTGGTGGAAC TGGACATCCT CTTCCAAGAA GCGGACTACA TCACCCTCCA CATTCCCAAA
ACGCCAGAAA CTGCCAATCT GATCAATGCC GAGACTTTGG CGAAGATGAA GCCGACGACT
CGGATCATCA ACTGTGCTCG CGGCGGCGTG ATTAATGAGC AGGCCTTGGC TGACGCGATC
GCTGCTGGCA AAATTGGCGG GGCAGCCCTC GATGTTTACG ACCAAGAACC GCTCCAAGCC
GATTCCCCCC TGCGGGCCTT GGGCAAAAAC CTGATCCTGA CGCCGCACCT CGGCGCTTCG
ACGACGGAAG CCCAGGTCAA CGTTGCGGTT GATGTGGCTG AACAAATCCG GGACGTCTTG
CTGGGGCTAC CAGCGCGCTC GGCAGTCAAC ATTCCCGGGC TCTACCCAGA CATTCTGGAA
AAACTACGGC CCTACTTGCA GCTGGCGGAA ACCCTCGGCA ACCTGCTCAG CCAAGTCGCC
GGTGGCCGCT TGGAACAGCT GACGGTGCGA CTGCAAGGGG AATTAGCCGC GCAACAGAGC
CAGCCGATCG TGGTTGCCGC CCTCAAAGGC TTACTGACCC AAGCGCTGCG CGAGCGGGTC
AACTACGTTA ACGCCATGAT CGAAGCCAAA GAGCGGGGCA TTCGGATCAT CGAAACGCGG
GATGAATCCG TCCGCGATGA CTACGCTGGC GGTTCGCTGC AACTGGTGGC GACCGGCTCC
AATGGCGAAC ACCGCGTCAT GGGTGCTCTG CTCGGTGATG GCGAAATTCG AATCACCAAT
GTCGATGAGT TTCCGGTCAA CGTGCCGCCC AGCCGCTACA TGCTGTTCAC ACGCCACCGC
GATATGCCCG GCATCATCGG CAAGATCGGC TCGCTCTTGG GGAGCTTTAA CGTCAATATC
GCCAGCATGC AGGTCGGACG CCGGATTGTG CGCGGCGACG CGGTGATGGT ACTGAGCTTG
GATGATCCGC TGCCGGAAGG CATCTTGGCG GAAATCACCA AGGTAGCTGG CATCAGTGAC
GCCTACACGG TGGTGCTCTA G
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| Protein sequence | MIGRICGSSI PVARWLTMPK VLVSDPIDQV GLDILSQVAQ VDVKTGLSPS ELAQIIGEYD
ALMLRSGTRV TAEVIEAGQK LRIIGRAGVG VDNVDVPAAT RRGIVVVNSP EGNTIAAAEH
TLAMMLSLSR HIPDANASTK SGGWDRKSFV GTEVYKKTLG VVGLGKIGSH VATVAKAMGM
KLLAYDPFIS AERAEQIGAR LVELDILFQE ADYITLHIPK TPETANLINA ETLAKMKPTT
RIINCARGGV INEQALADAI AAGKIGGAAL DVYDQEPLQA DSPLRALGKN LILTPHLGAS
TTEAQVNVAV DVAEQIRDVL LGLPARSAVN IPGLYPDILE KLRPYLQLAE TLGNLLSQVA
GGRLEQLTVR LQGELAAQQS QPIVVAALKG LLTQALRERV NYVNAMIEAK ERGIRIIETR
DESVRDDYAG GSLQLVATGS NGEHRVMGAL LGDGEIRITN VDEFPVNVPP SRYMLFTRHR
DMPGIIGKIG SLLGSFNVNI ASMQVGRRIV RGDAVMVLSL DDPLPEGILA EITKVAGISD
AYTVVL
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