Gene Synpcc7942_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1494 
Symbol 
ID3773667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1545382 
End bp1546095 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID637799927 
Producthypothetical protein 
Protein accessionYP_400511 
Protein GI81300303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCC GTCGTCTGTT GCCCCTGCTC TGCTTGCTGT TGACTGTGGC GCTTGGTGGC 
TGTGTCCAAG CAGAAACGAC GATTCGCTTT CAAGGGCAAA CGGCCGGTGA ATTGATCCAA
CATGTGAAGC TGAACGATCG CCTCAGTGCC CTAAATCGAC CTGCAGCTCA GCAGTGGTTT
CAGCAACTTT CCCAGCGTGG CAAACAACTG GGTGGCAAAG TACGGCGCGA TCGCAATGAG
TGGTGGCTGA CTCTTCCCTT TGATAATGGC CGCGATCTCG AAACGAAATT CGCTCAGCTC
TACTCTCCCC TCGAAAGACC GGAGTCTACA CCCCTGATCT TGCCGGAACC GAGCCTGACG
GTCCGCCAGA GTAATGCCCT ACTGGCGATT GGCAATCAGC TCGATTTGAA CGTTGATCTC
TCAGATTTTG CGATCGCCCG CCGCGATCAA CAGGTGTTGT TTGACCCAGG GGCACTGCTC
GATCTGGAAG TTTGCTTGGA AACGCCACGC GGTAGTCGCA GTCAGCCCCA GCCCAGCGCC
AGTAGTGCGC AGGGTAAGCT CCAGCGACAG TGCTGGAAGC TGCAGTCTGG CGAGAACCAT
CTGCAATGGT CGTTCTGGCT GCCGAGTTTT ATCGGCATTG GCAGTCTGAT GATCGGTTTG
GTTGTGGCGA TCGGCTGGCA GATCCGCAAA CAGTTAGTGG CTACAGAGCC CTAA
 
Protein sequence
MAFRRLLPLL CLLLTVALGG CVQAETTIRF QGQTAGELIQ HVKLNDRLSA LNRPAAQQWF 
QQLSQRGKQL GGKVRRDRNE WWLTLPFDNG RDLETKFAQL YSPLERPEST PLILPEPSLT
VRQSNALLAI GNQLDLNVDL SDFAIARRDQ QVLFDPGALL DLEVCLETPR GSRSQPQPSA
SSAQGKLQRQ CWKLQSGENH LQWSFWLPSF IGIGSLMIGL VVAIGWQIRK QLVATEP