Gene Synpcc7942_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1459 
Symbol 
ID3773631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1511592 
End bp1512212 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content59% 
IMG OID637799891 
Producthypothetical protein 
Protein accessionYP_400476 
Protein GI81300268 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0233371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00798208 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTGGGTC TGGCGATTCA TACTTCCACC CCCACCTTGG GGCTAGCGCT CAGTCAAGGA 
GCTGAGCTTC CGCTGGGGCA GACTTGGGAG GTTGGTCGCG ATACAGCAGC GGTCCTACTG
CAGCACCTAC AAGACTTTAT TGCTCCGCAT CGTTGGACAG ATTTAGACTT TCTAGCTGTT
GCCTATGGGC CGGGCGGCTT CACGGGAACG CGAATTGGCG TTGTCACAGC CCGCACCTTG
GCTCAACAAT TAGAAATCCC TCTCTTTGGC CTCTCAACCT TGGCGGGGTT GGCTGCCGCC
CAATGGCGAC AAACAGGGCA GAACCAAGCG ATTGCCGTGT CGATGGATGC CCAGCGGGGT
CAGTTGATTG GCGCACTGTA TGGCTGTCAG GATGGCATTC CCGTTGCCCT AGAAGCAGAG
CAGGTCTACG AACCAGTGGC CTGGACTGAG CGATTGGCCA GTTGGGGACA GGAAGATTGC
CGAGCAGATG CCGCGATCGC AACCACGGTG ACGGATCTCC TCGCGATCGC AGAACGCCAG
TGGCAACGGG GCGATCGCCC TGATTGGTCT TCTGCTTTGC CCTACTACGG CCAGCATCCA
GTAACCATCA CGGCAGGCTA G
 
Protein sequence
MLGLAIHTST PTLGLALSQG AELPLGQTWE VGRDTAAVLL QHLQDFIAPH RWTDLDFLAV 
AYGPGGFTGT RIGVVTARTL AQQLEIPLFG LSTLAGLAAA QWRQTGQNQA IAVSMDAQRG
QLIGALYGCQ DGIPVALEAE QVYEPVAWTE RLASWGQEDC RADAAIATTV TDLLAIAERQ
WQRGDRPDWS SALPYYGQHP VTITAG