Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1455 |
Symbol | |
ID | 3773627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1508394 |
End bp | 1509401 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799887 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_400472 |
Protein GI | 81300264 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.346533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0465757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTCGAC CTGGCGTTGG CGTTGCAATC ACTGGCAGTG GGTCCGCTGT TCCTTCTACA ACCCTCAGTA ATGACCAACT CTCCCAGTTG GTTGAAACCT CGGATGAATG GATCCGAAGC CGGACTGGGA TTGGTCAGCG CCGAGTCGCA CAGCCTCAAA TTGAAAGTCT CTCTTCCTTG GCGGCGGCGG CAGGTCAGTC AGCTCTCGAA GCTGCAGGGC TAGAAGCGAC ATCGGTTGAT TTGATTTTGC TGGCGACGTC AACCCCCGAC GATCTGTTCG GCAGTGCCTG CCAAGTGCAA GCCGCCTTGG GCGCGACCCA AGCCGTAGCC TTTGACCTGA CCGCTGCTTG TTCCGGCTTC TTGTTTGCCC TCGTAACCGG CGCTCAGTTT ATCCGCAGTG GAGCCTACCG CACCGTTTTG GTGATTGGGG CGGATGTGCT GTCGCGCTGG ACAGACTGGA GCGATCGCCG CACCTGTGTG CTGTTTGGGG ATGGCGCCGG GGCCGTTGTT CTGCAGGCCA GCGAGATTGA TCAACTGCTC GGCTTTGAAA TGCGCAGTGA TGGCAGCCTC AACGGCTGTT TGACCCTGGC TTATCAAGCT GATAACCAGT CGCTGCTCTC GGATATTGAG ATTGCTCAGG GCACTTATCA GCCGGTAGCA ATGAATGGCC AAGAGGTCTA TCGTTTTGCG GTGAAGCGGG TTCCCGAGAT CCTCGAGAAG ACGCTGTTCC ACGCCGGGAT CGATCGCCAA GAAGTCGATT GGTTACTGCT ACACCAGGCC AACCAACGCA TTCTCGATGC AGTCGCCGAT CGCCTTGATA TTTCCCGTGA TCGCGTACTT AGCAACTTGG TGAACTACGG CAATACCTCC TCCGCCACGA TCCCCTTGGT TTTGGATGAG GCCGTCAAAG CTGGGAAGAT TCAATCGGGC GACTTAATCG CTGCTTCAGG GTTTGGAGCA GGGTTGAGCT GGGGCGCAGC GCTGTTCCGT TGGGGCACGG TGGTTTAG
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Protein sequence | MTRPGVGVAI TGSGSAVPST TLSNDQLSQL VETSDEWIRS RTGIGQRRVA QPQIESLSSL AAAAGQSALE AAGLEATSVD LILLATSTPD DLFGSACQVQ AALGATQAVA FDLTAACSGF LFALVTGAQF IRSGAYRTVL VIGADVLSRW TDWSDRRTCV LFGDGAGAVV LQASEIDQLL GFEMRSDGSL NGCLTLAYQA DNQSLLSDIE IAQGTYQPVA MNGQEVYRFA VKRVPEILEK TLFHAGIDRQ EVDWLLLHQA NQRILDAVAD RLDISRDRVL SNLVNYGNTS SATIPLVLDE AVKAGKIQSG DLIAASGFGA GLSWGAALFR WGTVV
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