Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1452 |
Symbol | |
ID | 3773624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1504758 |
End bp | 1506194 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799884 |
Product | DNA repair protein RadA |
Protein accession | YP_400469 |
Protein GI | 81300261 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00987951 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGCGAT CGCGAAGCGA ATATGTATGT CAAAACTGCG GCCATCGTGC ACCGCGTTAC GTCGGCCGCT GTCCCGCCTG CGAAAGCTGG AATAGCCTCG TGGAGGAAGC AATCGCGCCA ACGGCTAAGA CGGCGATCGC GACCGTCTTA CCTTCCCGAC AACGCCGCGA TCGCTTAGCT GAAGCCCCAC CCCAAGCGGT TGCTGCCCAG CCCCTCAGTG CGATCGCGGA TGTCAGTCAG CAGCGGATTG CCTCAGGTTC TGGCGAGTTC GATCGGGTTC TCGGTGGGGG GTTAGTGCCG GGTTCTTTGG TGTTGATTGG TGGTGATCCG GGCATTGGTA AATCAACACT GCTGCTGCAG ACCGCCACGG CTCTCTCCCA ACAGCAGCCA ATTCTCTACG TCTGTGCCGA GGAATCGGGT CAGCAGGTCA AGCTGCGCTG GCAGCGGATT GCAGCCCACC GATCGCCCAA TCAGGCGGAT CAGCAGTTCT ATTTACTGCC GGAAATCGAC CTGGATGCGA TCGTGGCGGA ACTGGAGACT CTGCGTCCCC CTGTTGCCAT CATCGACAGT ATCCAAGCGC TCTACAGCCC AGCCCTCGGG TCTGCGCCGG GCTCCGTCGC CCAAGTGCGG GAATGCACGG CGGCCCTGAT GCGCGTGGCG AAGCAACTGA CAATCACCTT GCTGATCGTC GGTCATGTCA CCAAAGACGG CGCCATCGCG GGGCCTAAGG TGTTGGAACA CCTCGTCGAT ACGGTGCTTT ACTTCGAGGG TGATCGCTTT GCCAGTCACC GACTGCTGCG ATCGGTCAAG AACCGCTTTG GAGCGTCTCA GGAACTGGGC ATCTTTGAGA TGGTCGATCG CGGTCTGGAA GAGGTCGGTA ATCCCTCAGC GCTGTTCCTG GGCAGTCGTG ATCAAGCAAC TAGTGGTACA GCTACGATCG TCGCCTGCGA GGGCACCAGG CCGCTGCTAG TCGAGCTGCA AGCCCTCGTT AGTCCCAGTA GCTATAGTTC ACCGCGCCGT GCTGGTACGG GAATTGAGTA CAACCGCTTG CTGCAAATTT TGGCGGTCTT AGAAAAACGC TTGGGTTTGC CGCTGTCAAA ATTCGATGCC TACGTCGCCT CGGCTGGCGG GCTGAATGTG GCTGAACCCG CTGCGGATTT GGGAATTGCG ATCGCTCTTG TCGCCAGTTT CCGCGATCGC TGCCTGCGGC CCGATACGGT ACTGATTGGT GAAATCGGCT TAGGGGGACA AGTGCGCCCT GTCAGTCAGG TTGAACTGCG CCTCAAGGAG GCTGCCAAGC TCGGCTTTCA ACGAGCGCTC TTACCCAAGG GACAGGAGCG CTGCGAGTCG GATCTGGAAC TGGTGCCGGT CAGCCGCTTG GTTGATGCGA TCGGTCTAGC GCTGCAAGAA GCCCCCCCGA GCAGCGATCG TTCTTAG
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Protein sequence | MARSRSEYVC QNCGHRAPRY VGRCPACESW NSLVEEAIAP TAKTAIATVL PSRQRRDRLA EAPPQAVAAQ PLSAIADVSQ QRIASGSGEF DRVLGGGLVP GSLVLIGGDP GIGKSTLLLQ TATALSQQQP ILYVCAEESG QQVKLRWQRI AAHRSPNQAD QQFYLLPEID LDAIVAELET LRPPVAIIDS IQALYSPALG SAPGSVAQVR ECTAALMRVA KQLTITLLIV GHVTKDGAIA GPKVLEHLVD TVLYFEGDRF ASHRLLRSVK NRFGASQELG IFEMVDRGLE EVGNPSALFL GSRDQATSGT ATIVACEGTR PLLVELQALV SPSSYSSPRR AGTGIEYNRL LQILAVLEKR LGLPLSKFDA YVASAGGLNV AEPAADLGIA IALVASFRDR CLRPDTVLIG EIGLGGQVRP VSQVELRLKE AAKLGFQRAL LPKGQERCES DLELVPVSRL VDAIGLALQE APPSSDRS
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