Gene Synpcc7942_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1448 
Symbol 
ID3773620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1501343 
End bp1502305 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content57% 
IMG OID637799880 
Productquinolinate synthetase 
Protein accessionYP_400465 
Protein GI81300257 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.138548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTCG CTGCTGATCG TCCCACCACT GATCTTCCTG CCGACTTACC TGCCGCGATC 
GCGGCGCTCA AGCAAGAGCT GAATGCGGTT ATCTTGGCGC ACTACTACCA AGAAGCGGCG
ATTCAAGATG TGGCGGACTA CATTGGTGAT TCACTCGGTC TGTCGCGCCA AGCCGCAGCA
GCGGACGCCG ATGTGATCGT CTTTGCCGGC GTCCATTTCA TGGCCGAGAC GGCGAAAATT
CTCAACCCAC AGCGACAAGT GTTGCTGCCG GACCTGGCCG CAGGTTGCTC CTTAGCCGAT
AGCTGCCCAC CCGAGGCATT TGCCGCGTTT AAGGCCGCTC ATCCCAATCA CATCGTTATT
TCCTACATCA ACTGCACCGC CGAGATTAAG GCGCTTAGCG ACATCATCTG CACCAGTTCC
AATGCGGTGA AGATTGTTCA GCAGATTCCT GTGGATCAGC CGATTATCTT TGCCCCCGAT
CGCAACTTGG GTCGCTACGT CATGCAGCAA ACAGGCCGTG ATTTGGTGCT CTGGGATGGC
AGTTGTATTG TCCACGAGAC CTTTTCAGAA CAACGCCTGC TGGAACTGCA AGCGCGGCAT
CCCGACGCCG AAATCATCGC GCACCCCGAA TGCGAAACGC CGGTTCTTGA TCAGGCTCGC
TTCATCGGCT CGACGACAGC ATTGCTAAAC TACAGCCTCA ACAGTCCCAG CCGCGAGTTC
ATCGTCGTCA CCGAGCCGGG CATCATCCAC CAGATGCAGC AAGCGGCGCC GGAGAAGACG
TTTATTCCTG CCCCTCCCCA AGACACTACC TGCGCCTGCA ATGAATGCCC GTTCATGCGG
CTGAACACGC TCGAGAAACT CTATCTCTGT ATGCGCGATC GCCGGCCGGA AATTCAGATT
CCAGAAGAAA CCCGCCTGGC AGCCCTTCGC CCAATCGAGC GGATGCTGGC AATGAGCGCT
TGA
 
Protein sequence
MFLAADRPTT DLPADLPAAI AALKQELNAV ILAHYYQEAA IQDVADYIGD SLGLSRQAAA 
ADADVIVFAG VHFMAETAKI LNPQRQVLLP DLAAGCSLAD SCPPEAFAAF KAAHPNHIVI
SYINCTAEIK ALSDIICTSS NAVKIVQQIP VDQPIIFAPD RNLGRYVMQQ TGRDLVLWDG
SCIVHETFSE QRLLELQARH PDAEIIAHPE CETPVLDQAR FIGSTTALLN YSLNSPSREF
IVVTEPGIIH QMQQAAPEKT FIPAPPQDTT CACNECPFMR LNTLEKLYLC MRDRRPEIQI
PEETRLAALR PIERMLAMSA