Gene Synpcc7942_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1443 
Symbol 
ID3773615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1497217 
End bp1498290 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content56% 
IMG OID637799875 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_400460 
Protein GI81300252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype
[TIGR00167] ketose-bisphosphate aldolases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.66755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.139145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG TACCCTTGCG GCTCATGCTT GATCATGCAG CTGAGAACGA ATACGGCATT 
CCTGCTTTCA ACGTCAACAA CCTGGAGCAG GTTCAGTCGA TTCTGCAAGC GGCAGACGAA
ACTGATAGCC CTGTCATTCT GCAAGCGTCT CGGGGTGCCC GCAGCTACGC TGGCGAAAAC
TTCTTGCGCC ACCTGATTCT GGCGGCTGTG GAAACCTACC CCCACATCCC CATCGCCATG
CACCAAGACC ATGGCAACAG CCCGGCGACC TGCTACTCCG CCATCAAAAA CGGCTTTACC
AGCGTGATGA TGGACGGCTC CTTGGAAGCC GACGCTAAAA CCCCTGCCAG CTACGAGTAC
AACGTTGAAG TGACCCGTCA AGTGGTGGAC GTGGCTCACT CAATCGGCGT CAGCGTTGAA
GGCGAGCTAG GTTGCTTGGG TTCCTTGGAA ACCGGCAAAG GTGAAGCCGA AGACGGCCAT
GGTTTCGAGG GCACCCTCGA CCATTCGCAA CTACTGACCG ACCCTGACCA GGCTGTTGAC
TTCGTTGAAA AAACGCAAGT CGACGCTCTG GCTGTTGCGA TCGGCACCAG CCACGGCGCT
TACAAATTCA CCCGCAAACC GACGGGCGAA ATCTTGGCGA TCAGCCGCAT CGAAGAAATC
CACCGTCGTC TGCCCAATAC CCACTTGGTG ATGCACGGTT CTTCGTCGGT TCCCCAAGAG
CTGCTGGAAC TGATCAACGA ATACGGCGGT CAGATTCCCG AGACCTACGG CGTACCTGTC
GAAGAGATCC AAAAAGCGAT CAAACTCGGC GTCCGCAAAA TCAACATCGA CACCGATAAC
CGCTTGGCCT TTACGGCTGC GGTTCGTGAA GCAGCGGCCA AAGACCCCAG CAACTTTGAC
CCCCGCCACT TCAACAAACC GGCGATCAAG TACATGAAAC AAGTGTGCGT CGATCGCTAC
GTGGCCTTCA ATACCGCTGG ACAAGCCAGC AAGATCAAGC AAGAAGGCTT GGATGAGTTC
GCAGCGAAAT ACGCCAAAGG CGAACTGCGC GCTCAAACCA AAGTGTTTGC CTAA
 
Protein sequence
MALVPLRLML DHAAENEYGI PAFNVNNLEQ VQSILQAADE TDSPVILQAS RGARSYAGEN 
FLRHLILAAV ETYPHIPIAM HQDHGNSPAT CYSAIKNGFT SVMMDGSLEA DAKTPASYEY
NVEVTRQVVD VAHSIGVSVE GELGCLGSLE TGKGEAEDGH GFEGTLDHSQ LLTDPDQAVD
FVEKTQVDAL AVAIGTSHGA YKFTRKPTGE ILAISRIEEI HRRLPNTHLV MHGSSSVPQE
LLELINEYGG QIPETYGVPV EEIQKAIKLG VRKINIDTDN RLAFTAAVRE AAAKDPSNFD
PRHFNKPAIK YMKQVCVDRY VAFNTAGQAS KIKQEGLDEF AAKYAKGELR AQTKVFA