| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1409 |
|---|
| Symbol | |
|---|
| ID | 3774122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1460847 |
|---|
| End bp | 1461869 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799841 |
|---|
| Product | iron transport system substrate-binding protein |
|---|
| Protein accession | YP_400426 |
|---|
| Protein GI | 81300218 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTTGTC TACGTATCTG GTCAACGGGC CTTGCTGCTC TGCTCCTCAG CACAGGCCTT
GCAGCCTGCT CAGGGGGTAG CGATAAGGTC GTCAACATCT ACTCGTCCCG GCATTACAAC
CAAGACGATG AACTCTACAA AGCTTTCACA GACAAGACCG GCATTCAGGT CAATGTGATT
GAAGGCAAAG ATGCTGAGCT GATTGAGCGC ATCCAAAGTG AAGGAGCCAA CAGCCCTGCC
GATGTCCTGA TTACGGTGGA TGCGGGTCGC CTGTGGCAGG CGGAGTCAAA GGGACTCTTC
CAGCCCGTGC AATCATCCGT GCTCACCGCT GGCCTGCCTG ATGACCTGCG CGATCCGGAC
GGCCGCTGGT TTGGATTTGC CCGTCGGGCC CGCGTCATCA TCTACAACAA AGCCAAGGTT
CAGCCCAGTC AGCTTTCCAC CTATCAAGCC CTCGCCAACC CCGAGTGGCG TGGCAAGCTA
TGCATGCGCA GCTCTGACAA CATCTACAAC CAGTCCTTAG TTGCGGCAAC GATCGCAACG
CAAGGGGAAG CAGCTACGGA AGAGTGGATC AAAGGTTTGA CGGCAAACTT TGCGCGACCG
CCCCAGGGCA ACGACACCGC TCAGATCAAG GCGGTTGCGG AAGGCGTCTG TGATGTCGCG
GTCGTCAATC ACTACTACGT CGCACGGTTG TTGGAATCCA AAGAGGCGAG CGATCGCGAA
ATTGCCTCAA AAGTCGGGGT CTTTTTCCCG CGCCCCACCC ACGTCAATGT CAGTGGTGCC
GGCGTTGCGA CCAATGCTCC ACACAAGGAA AATGCAGTTG CATTTCTCGA GTTCTTGGCG
AGCCCCGACG GACAGCGCTA CTTCACCCAA GGCACCTACG AGTATCCAGC CAAAGCCAAT
ACGGCTGAGG ATGCAGTGGT CCAAAGCTTT GGCCCCTTTG AGGCCGCTCC CGTCAATGTC
GATGTCTACG GGGCCAACAA TGCTGAAGCG GTGAAGATTA TGGACCGTGC AGGCTGGCGT
TAA
|
|---|
| Protein sequence | MSCLRIWSTG LAALLLSTGL AACSGGSDKV VNIYSSRHYN QDDELYKAFT DKTGIQVNVI
EGKDAELIER IQSEGANSPA DVLITVDAGR LWQAESKGLF QPVQSSVLTA GLPDDLRDPD
GRWFGFARRA RVIIYNKAKV QPSQLSTYQA LANPEWRGKL CMRSSDNIYN QSLVAATIAT
QGEAATEEWI KGLTANFARP PQGNDTAQIK AVAEGVCDVA VVNHYYVARL LESKEASDRE
IASKVGVFFP RPTHVNVSGA GVATNAPHKE NAVAFLEFLA SPDGQRYFTQ GTYEYPAKAN
TAEDAVVQSF GPFEAAPVNV DVYGANNAEA VKIMDRAGWR
|
|---|
| |