Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1403 |
Symbol | |
ID | 3774116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1454593 |
End bp | 1455369 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799835 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_400420 |
Protein GI | 81300212 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0310666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTG ACTGCCTGCC AGCACTTCAG GACAACTACA TCTTTCTGCT AGTTGATGTA GAGCAGCGAC AGGCCGCGGT AGTTGACCCA GCGGAAGCAG AGCCAGTGCT CGCTGCTTTG CAAGCGGAAG GGCTCACCCT AACAGCCATC CTGAATACCC ACCATCACGG CGATCATGTC GGCGGTAACC GGCGGTTGCT ACGGCAATTT CCCGAGGCAG CTGTCTCCGC CAGCGCCGTC GATCGCGATC GCATTCCAGG TCAAACGGTC TTGCTCGAAG CGGGCGATCG CCTACAGATT TGTGGTCAAA CCGCCGAAGT CTTATTTGTG CCCGGACATA CCCGTGGCCA CATCGCCTAT TACTTCCCTG AGGTAGCTGA GGGCAACCCT AGGGGCGCTT TGTTCTGCGG CGACACCCTG TTTGCCGGTG GCTGCGGTCG TCTGTTTGAA GGGACGCCGG CGCAAATGCT GGACTCCTTG CAACAGCTGC GATCGCTCCC TGACGACACC GCAATCTACT GCGCCCACGA GTACACCTTG AACAACCTCC GCTTCGCGCT AACAGTAGAG CCAGACAATT TTGACCTGCA ACAGCGCTAT CAAGCCGTCG CGATCGCTCG TCAGCAAGGA CAGGCGACTA TTCCTAGCCG TTTAGACATT GAAAAAGCTA CCAATCCCTT TCTGCGCTGG GATCAAGCAG CCCTGCAAGC GGCCGTTTCC AGTCAAGATC CGGTTCAAAC CTTGGCTCGG CTGCGGAGCC GGAAGGATCA GTTTTAG
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Protein sequence | MRIDCLPALQ DNYIFLLVDV EQRQAAVVDP AEAEPVLAAL QAEGLTLTAI LNTHHHGDHV GGNRRLLRQF PEAAVSASAV DRDRIPGQTV LLEAGDRLQI CGQTAEVLFV PGHTRGHIAY YFPEVAEGNP RGALFCGDTL FAGGCGRLFE GTPAQMLDSL QQLRSLPDDT AIYCAHEYTL NNLRFALTVE PDNFDLQQRY QAVAIARQQG QATIPSRLDI EKATNPFLRW DQAALQAAVS SQDPVQTLAR LRSRKDQF
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