Gene Synpcc7942_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1403 
Symbol 
ID3774116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1454593 
End bp1455369 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID637799835 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_400420 
Protein GI81300212 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0310666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG ACTGCCTGCC AGCACTTCAG GACAACTACA TCTTTCTGCT AGTTGATGTA 
GAGCAGCGAC AGGCCGCGGT AGTTGACCCA GCGGAAGCAG AGCCAGTGCT CGCTGCTTTG
CAAGCGGAAG GGCTCACCCT AACAGCCATC CTGAATACCC ACCATCACGG CGATCATGTC
GGCGGTAACC GGCGGTTGCT ACGGCAATTT CCCGAGGCAG CTGTCTCCGC CAGCGCCGTC
GATCGCGATC GCATTCCAGG TCAAACGGTC TTGCTCGAAG CGGGCGATCG CCTACAGATT
TGTGGTCAAA CCGCCGAAGT CTTATTTGTG CCCGGACATA CCCGTGGCCA CATCGCCTAT
TACTTCCCTG AGGTAGCTGA GGGCAACCCT AGGGGCGCTT TGTTCTGCGG CGACACCCTG
TTTGCCGGTG GCTGCGGTCG TCTGTTTGAA GGGACGCCGG CGCAAATGCT GGACTCCTTG
CAACAGCTGC GATCGCTCCC TGACGACACC GCAATCTACT GCGCCCACGA GTACACCTTG
AACAACCTCC GCTTCGCGCT AACAGTAGAG CCAGACAATT TTGACCTGCA ACAGCGCTAT
CAAGCCGTCG CGATCGCTCG TCAGCAAGGA CAGGCGACTA TTCCTAGCCG TTTAGACATT
GAAAAAGCTA CCAATCCCTT TCTGCGCTGG GATCAAGCAG CCCTGCAAGC GGCCGTTTCC
AGTCAAGATC CGGTTCAAAC CTTGGCTCGG CTGCGGAGCC GGAAGGATCA GTTTTAG
 
Protein sequence
MRIDCLPALQ DNYIFLLVDV EQRQAAVVDP AEAEPVLAAL QAEGLTLTAI LNTHHHGDHV 
GGNRRLLRQF PEAAVSASAV DRDRIPGQTV LLEAGDRLQI CGQTAEVLFV PGHTRGHIAY
YFPEVAEGNP RGALFCGDTL FAGGCGRLFE GTPAQMLDSL QQLRSLPDDT AIYCAHEYTL
NNLRFALTVE PDNFDLQQRY QAVAIARQQG QATIPSRLDI EKATNPFLRW DQAALQAAVS
SQDPVQTLAR LRSRKDQF