| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1360 |
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| Symbol | |
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| ID | 3775553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1399742 |
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| End bp | 1401052 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799791 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_400377 |
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| Protein GI | 81300169 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGCTT CACCCATCTC TCGACCAGCG ACTCAAACAA AGGTGAAGCG GATCTCGTCG
CCAGCATCAA AACCCCGACG GCTTTGGCCC CAAGTCGGGT TGATGGCTGC GATCGCCAGC
GCTGCCGCGA TCGCTACGGC AGGTCTTGTT TATGCCCTCC CCCTCAGCCG TTCTGCCAAG
CCGGTTGCGC CCAACTCGCC CTTGATGGCC CTGCTGCCCT ACAGCTTCAA TCGGCCGATC
AATGTTCTGG TCATGGGCTT GGATCAGTCG GAAACCGGTG AACAAGCAGA GAAGTTTGAC
ACTCGCAGCG ATACCCTGCT GTTATTGCGG TTTGACCCCC TGGAAGGGAC AACCAGCCTC
CTCTCGATTC CCCGCGACAC CCAAGTCGCA ATCCCTGGCT ACGGCACCAC CAAAATTAAT
GCGGCTAACG TCTTTGGGGG GCCGGCTCTG GCGGCGGATG TGGTTAGTCG CACCCTCAAT
GACGTACCGA TCGATCGCTA CCTGCGGATT GACACCACTG CTTTTAAGGA GCTGGTCGAT
TTGGTCGGTG GGGTTGAGGT GTATGTGCCC AAGCCGATGC GCTATACCGA CAACACCCAA
AAGCTCTACA TCGATCTCCC AGCGGGGCGC CAAACCCTGA ATGGCGATCA GGCAGAACAG
TTCGCCCGCT TCCGTTACGA CGAGCTGGGG GATATTGGGC GGGTGCAGCG CCAGCAAATG
TTGCTACGGG CCCTACGGGA AAAGCTGGCC AATCCGCTGA TTCTGACGAA GGCACCCGAC
TTGGTCAAAG TCCTGCAAAA GTACGTCGAT ACCAACCTCA GCTTTGAAGA ACTGATGGCT
CTGGTCAGTA TTGGGCTGCA ACAGGATTTG GCCAATATCC GCATGGTGAT GCTGCCCGGT
CGCCCGATTA TGCAGGACGA CGTCAGCTAC TGGCGCTTGG ATGAAGGCGC TCGCGATCGC
CTAGTCAGTG ACTTTTTCAA CCAGATCAGT ATCCAGCCAA TCGATCGCTT GGCTTTTGAA
GACCTGCGCG TTGCCATTCA AGACTCATCG GGGAAACCCG AAGCAGCCCA AGCCCTTGCT
GAATCCTTAG CTAAGTTGGG AATTCGTCGC GTCTACATCA TTGAAGACTG GCCAGAGCCC
CTCGAGAAGA CACAAATTAT TGCCCAGCGG GGGGACTTAA TCCAAGCGGA AGGGTTGCAA
CAGCAGCTGA ATTTGGGTGA GGTCCGTGCA AGCTCTGATG GCGATATTGG CTCCGACCTG
ACAATTCGGA TTGGCCAAGA CTGGCAACCG ACCCCCAGCC CCAAGCCTTA A
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| Protein sequence | MGASPISRPA TQTKVKRISS PASKPRRLWP QVGLMAAIAS AAAIATAGLV YALPLSRSAK
PVAPNSPLMA LLPYSFNRPI NVLVMGLDQS ETGEQAEKFD TRSDTLLLLR FDPLEGTTSL
LSIPRDTQVA IPGYGTTKIN AANVFGGPAL AADVVSRTLN DVPIDRYLRI DTTAFKELVD
LVGGVEVYVP KPMRYTDNTQ KLYIDLPAGR QTLNGDQAEQ FARFRYDELG DIGRVQRQQM
LLRALREKLA NPLILTKAPD LVKVLQKYVD TNLSFEELMA LVSIGLQQDL ANIRMVMLPG
RPIMQDDVSY WRLDEGARDR LVSDFFNQIS IQPIDRLAFE DLRVAIQDSS GKPEAAQALA
ESLAKLGIRR VYIIEDWPEP LEKTQIIAQR GDLIQAEGLQ QQLNLGEVRA SSDGDIGSDL
TIRIGQDWQP TPSPKP
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