Gene Synpcc7942_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1349 
Symbol 
ID3775542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1381367 
End bp1382053 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID637799780 
Producthypothetical protein 
Protein accessionYP_400366 
Protein GI81300158 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.108709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT ACTTCTACCT GCATGGTTTT GCCTCGGGGC CAGAATCGGC TAAGGCCAAG 
TATTTACGCG GCTGCTTTCA GCGGCTAGGC CTAGAGCTGA TCTGCCCAGA CTTTAACGAG
CCCGACTTTT CCAGCCTGAC CTTCAGTCGT CAAGTAGCCC AAGTCGAAGC GCAACTGACC
GATGAGCCGA CGATCGTGAT TGGATCTAGT CTGGGCGGAC TGACGGCTGC TTGGCTAGGG
CAGCGCAATC CCCAGATCCA GAAGCTCGTT TTGCTTGCAC CGGCTTTTGA ATTTCTGGCT
CAGTGGTTGC CGCGTATGGA TGACTCCGCT CTAGCGCAGT GGCAGCAAGC AGGGTTTCGT
CCGGTTTACC ATTGGCGCGA TCGCGATTTT CGTCCTCTTC ATTGGCAATT TGTGGAAGAC
CTGCATCGCT GGCAAGATCA AGATTTAAAG CGATCGCTGC CCACCTTGAT CCTGCATGGC
ACGGCGGATG AAGTGATCGA TTTTGCCGCG AGCGAGCGAT TTGCCGTCCA GCGGCCTTGG
GTGACGCTGC AAGCGCTGAC CAGTGATCAT GCCTTGGGCA ATGTCAGTTC GCAAATTTGG
CGCGCCTGCC GGCAGTTTGC CGAACTTTCC GTCTGCGATC GCGGAGCGTT GAGTCAGAAG
AGCATTCCGG GCAATCGCCT ATCCTGA
 
Protein sequence
MTRYFYLHGF ASGPESAKAK YLRGCFQRLG LELICPDFNE PDFSSLTFSR QVAQVEAQLT 
DEPTIVIGSS LGGLTAAWLG QRNPQIQKLV LLAPAFEFLA QWLPRMDDSA LAQWQQAGFR
PVYHWRDRDF RPLHWQFVED LHRWQDQDLK RSLPTLILHG TADEVIDFAA SERFAVQRPW
VTLQALTSDH ALGNVSSQIW RACRQFAELS VCDRGALSQK SIPGNRLS