Gene Synpcc7942_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1345 
Symbol 
ID3775538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1378990 
End bp1379595 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content54% 
IMG OID637799776 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_400362 
Protein GI81300154 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCTTG CCGAAGGCGT TCAACTAGTT ACATTCATCA TCCTGACGGC TGGGGTGGTT 
TTGGCAGCCC TAGGTGTTGT ACTCAGCAGC AACATTGTCT ACTCGGCCTT TTTGCTGGGA
GGCGTATTCA TCAGCATCGC TGGTCTCTAC CTGCTGCTGA ATGCCAGCTT TGTGGCCTTT
GCCCAAGTGC TGATTTATGT TGGCGCTGTC AACGTCTTAA TCCTGTTTGC GATCATGTTG
GTCAACAAAC GGGAAGACTT CCGACCACTC AAGTTTAATT GGCTGCGCAA AGGGCTGACG
GTTCTGGTTT GTGGCGGTCT CTTTGCCCTC CTGAGCCTGA CTGTAATTTC GACCCCTTGG
GCGGTGACGC CAACCCCTGG TGCCAGTGGC GATGAAGCGA TTTACCTGAT CGGTGAACAC
TTCTTCAGCG ACTACCTGCT GCCCTTTGAG TTGGCTTCGG TGTTGCTGTT GATGGCGATG
ATTGGGGCGA TCGTCTTGGC CCGCCGCGAC TTCGAACCTG AAGACCTGAT CACGGGTGCG
GCCGCAGATT TGCAGCTACC CGAGCGATCG CGGGAAGAGT TGCTGACAGG TGCTGGCAAG
AAATAA
 
Protein sequence
MTLAEGVQLV TFIILTAGVV LAALGVVLSS NIVYSAFLLG GVFISIAGLY LLLNASFVAF 
AQVLIYVGAV NVLILFAIML VNKREDFRPL KFNWLRKGLT VLVCGGLFAL LSLTVISTPW
AVTPTPGASG DEAIYLIGEH FFSDYLLPFE LASVLLLMAM IGAIVLARRD FEPEDLITGA
AADLQLPERS REELLTGAGK K