Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1345 |
Symbol | |
ID | 3775538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1378990 |
End bp | 1379595 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799776 |
Product | NADH dehydrogenase subunit J |
Protein accession | YP_400362 |
Protein GI | 81300154 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTCTTG CCGAAGGCGT TCAACTAGTT ACATTCATCA TCCTGACGGC TGGGGTGGTT TTGGCAGCCC TAGGTGTTGT ACTCAGCAGC AACATTGTCT ACTCGGCCTT TTTGCTGGGA GGCGTATTCA TCAGCATCGC TGGTCTCTAC CTGCTGCTGA ATGCCAGCTT TGTGGCCTTT GCCCAAGTGC TGATTTATGT TGGCGCTGTC AACGTCTTAA TCCTGTTTGC GATCATGTTG GTCAACAAAC GGGAAGACTT CCGACCACTC AAGTTTAATT GGCTGCGCAA AGGGCTGACG GTTCTGGTTT GTGGCGGTCT CTTTGCCCTC CTGAGCCTGA CTGTAATTTC GACCCCTTGG GCGGTGACGC CAACCCCTGG TGCCAGTGGC GATGAAGCGA TTTACCTGAT CGGTGAACAC TTCTTCAGCG ACTACCTGCT GCCCTTTGAG TTGGCTTCGG TGTTGCTGTT GATGGCGATG ATTGGGGCGA TCGTCTTGGC CCGCCGCGAC TTCGAACCTG AAGACCTGAT CACGGGTGCG GCCGCAGATT TGCAGCTACC CGAGCGATCG CGGGAAGAGT TGCTGACAGG TGCTGGCAAG AAATAA
|
Protein sequence | MTLAEGVQLV TFIILTAGVV LAALGVVLSS NIVYSAFLLG GVFISIAGLY LLLNASFVAF AQVLIYVGAV NVLILFAIML VNKREDFRPL KFNWLRKGLT VLVCGGLFAL LSLTVISTPW AVTPTPGASG DEAIYLIGEH FFSDYLLPFE LASVLLLMAM IGAIVLARRD FEPEDLITGA AADLQLPERS REELLTGAGK K
|
| |