Gene Synpcc7942_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1334 
Symbol 
ID3775527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1364783 
End bp1366180 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content58% 
IMG OID637799765 
Productaminodeoxychorismate synthase, subunit I 
Protein accessionYP_400351 
Protein GI81300143 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0147] Anthranilate/para-aminobenzoate synthases component I 
TIGRFAM ID[TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TCGCCCGTCG AGTCGTGCAA CCCTTGGTGC GGGAAATTGC TTGGTGCGAT 
CCGCAGCAGG CCTTTGCGCC CTTCGCTCAA GATCCCCATG CAGTCCTGCT CGATCTGGGG
GAGCCAGCAA CGCCCGAAAG CCGTTACGCC TACCTCTGTC TGTCGCCCTA TGCCACCCAG
CGAGGCGATC GCTTGGTAAC TGAGGCTGAT CCTTTCCAGG CTTTGGCAAC GTCACTGGCC
ACAGTAGATT GGCAGACGAA TTCTGACTCT GACCTGCCTC CATTTCAGGG CGGTATCTGC
GGATTTCTGT CCTATGAATG TGGGGCTTGG CTGGAGCGGC TCCCGACACC GAAACCGGTT
GAACCTCGAC TGCCGCTCTG GTCGTTGAGC CTCTATGACT TGGTGGTTGC CTGCGATCGC
CAGCAACGGC GCACCTGGAT TTTCTCCTCG GGATTGCCGC TGCAGGATCC GCGCGATCGC
CAGCAACGGG CGGAACAACG ACTGCAATGG GTCTGCGATC GCCTGCAGTC AGCTCTACCT
TCACAGTCTC CTGATTGGCA GCCTCAGGCT GATTGGCAAG CCCTGCAAAC TGAAGCTGAC
TTTTGTCAGG CTGTGGATCA GGTCAAATGC CACATTCGCG CTGGCGATAT TTTTCAGGCC
AACTTAACCA CGGCTTTTCG CGCCAGTCAG CCAAAGGATC TGAGCCCTTG GCAACTCTAT
CGACGGCTCT ATCAGCTCAG CCCCGAACCT TTTTCGGCCT ACTTCGCAGG GGGCGATTTT
CAGTTGCTCT CGGTGTCGCC GGAGCGTTTT CTGCGCCTCG ACCGCGATGG TTGGGTAGAA
ACGCGCCCGA TTAAGGGAAC TCGTCCTCGT AGTGCCGATC CGGCTCACGA TCGCCAGTTA
GCGACGGAGT TGCAGGCCAG TGAGAAGGAT CGGGCAGAAA ACGTAATGAT CGTCGACCTC
CTGCGCAACG ACTTGGGTCG CGTTTGTCGT CCCCGCTCGA TTCAGGTGCC CCAACTCTGC
CAATTGGAAA GCTACGAGCA CGTCCATCAC CTCACCTCGC AGGTGATTGG TCAACTGCGA
TCGGGCTTGA CGGCGGTGGA TTTACTGCGG GCAACGTTCC CGGGCGGATC GATTACGGGA
GCGCCTAAAA TCCGCTCGAT GGAAATTATT CACGAGCTTG AACCGATTCC CCGCCAAGCC
TACTGTGGCA GTCTCTTTTG GCTGGGCTTT GACGGCAGCT TAGATGCCAG CATTTTGATT
CGGACGCTGC AAATCAGCCA AGGCCAAGTC CTTGCTCAAG CCGGTTGCGG CATCGTCGCT
GACTCCGATC CGCTAGACGA ATGCGCTGAG ATGCAGGTCA AGGTGCAACC CCTGTTGCGA
TCGCTCCAGC CCTCATGA
 
Protein sequence
MTAIARRVVQ PLVREIAWCD PQQAFAPFAQ DPHAVLLDLG EPATPESRYA YLCLSPYATQ 
RGDRLVTEAD PFQALATSLA TVDWQTNSDS DLPPFQGGIC GFLSYECGAW LERLPTPKPV
EPRLPLWSLS LYDLVVACDR QQRRTWIFSS GLPLQDPRDR QQRAEQRLQW VCDRLQSALP
SQSPDWQPQA DWQALQTEAD FCQAVDQVKC HIRAGDIFQA NLTTAFRASQ PKDLSPWQLY
RRLYQLSPEP FSAYFAGGDF QLLSVSPERF LRLDRDGWVE TRPIKGTRPR SADPAHDRQL
ATELQASEKD RAENVMIVDL LRNDLGRVCR PRSIQVPQLC QLESYEHVHH LTSQVIGQLR
SGLTAVDLLR ATFPGGSITG APKIRSMEII HELEPIPRQA YCGSLFWLGF DGSLDASILI
RTLQISQGQV LAQAGCGIVA DSDPLDECAE MQVKVQPLLR SLQPS