Gene Synpcc7942_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1333 
Symbol 
ID3775526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1364091 
End bp1364786 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID637799764 
ProductExsB 
Protein accessionYP_400350 
Protein GI81300142 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG CTGTAGTGTT GCTGTCCGGT GGGCTAGATT CTGCCACCGC TGCGGCTCAG 
GCGATCGCTG ATGGCTATGA AGCGATCGCC CTCTCGTTTC GCTATGGTCA GCGCCATGTG
CGGGAATTGG AAGCGGCGCG ATCGGTGGCG GCTGCTCTAG GGATCAATCA GCACTTTTTT
GTCGATGTCA ACATTGCCCA GTGGGGCGGC TCTTCCCTGA CGGATGCGGC GGAACCCCTG
CCAGGGTCCG GGGTCGTCGC CGGTGAGATT CCGTCAACCT ACGTGCCGGG GCGCAATACG
GTCTTCATTG CCTTAGCACT CTCGCTCGCA GAAGCGCAGC AGGCCAGCGC TATCTATCTC
GGCATCAATG CGGTGGATTA CAGTGGCTAT CCCGACTGTC GTCCCGACTA TTTGGCTGCT
TTTCAGCAAC TGGCGAGTCT CTCCTCCAAA GTGGGCGTCG AAGGTCAAGC CCCGCAACTG
GTTGCGCCGT TGATTCACGA TCACAAAGTC GATATCGTGC GGCGGGCCGT GGTGCTGGGC
GTGCCGATTC CAGCCACTTG GTCTTGCTAC GCCGGTGGTG CAGAAGCCTG TGGCCGTTGT
GATTCCTGCC GGATTCGCGA TCGCGCCTTG ATTGAAGCCG GCTATCCCGA ATGGGCTACC
GCGATCGGGC GATCGCTCGT TAGCCTCCAA CCATGA
 
Protein sequence
MAKAVVLLSG GLDSATAAAQ AIADGYEAIA LSFRYGQRHV RELEAARSVA AALGINQHFF 
VDVNIAQWGG SSLTDAAEPL PGSGVVAGEI PSTYVPGRNT VFIALALSLA EAQQASAIYL
GINAVDYSGY PDCRPDYLAA FQQLASLSSK VGVEGQAPQL VAPLIHDHKV DIVRRAVVLG
VPIPATWSCY AGGAEACGRC DSCRIRDRAL IEAGYPEWAT AIGRSLVSLQ P