| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1319 |
|---|
| Symbol | |
|---|
| ID | 3775512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1348834 |
|---|
| End bp | 1349373 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637799750 |
|---|
| Product | bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_400336 |
|---|
| Protein GI | 81300128 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCTT CTCAAATCGA ATTGCTGTCT GCCGACGAGC AGCGCCGCAC CCTCAATCGT
CTCGCTTCGC AGATTGTTGA GAGTGCCCGA CAGGTCGATC GCCTAGTCTT AATCGGGATT
CATACCCGAG GCGTTTATCT GGCAGAAGGA CTGGCGCAAG CGATCGCCCA GCTCGAAGGT
CAGCCAATCG CCTGGGGCAG TTTGGACATC ACCTTCTATC GCGATGACCT CGATCGCATC
GGGGCTCGCC AACCGGAGCG CAGCCGCATC CCCCAGGACT TATCGGGTTG CACCGTGGTT
CTGGTCGATG ACGTGATCTT CACCGGTCGA ACGATTCGCG CCGCCATGGA TGCCTTGAAT
GACTACGGCC GCCCTGCGAT CGTCCGCCTC GCAGTTCTGA TCGATCGCGG CAATCGGGAA
CTACCGATCC AGCCCGATTT CGTCGGCAAG GTTGTGCCGA CGCGGCGCAG TGAGCGGGTG
GAAGTCTACT TCCAGTCCGT TGATGGTCAC GAAGGGGTGG CACTGATCCG GCCCGACTGA
|
|---|
| Protein sequence | MSPSQIELLS ADEQRRTLNR LASQIVESAR QVDRLVLIGI HTRGVYLAEG LAQAIAQLEG
QPIAWGSLDI TFYRDDLDRI GARQPERSRI PQDLSGCTVV LVDDVIFTGR TIRAAMDALN
DYGRPAIVRL AVLIDRGNRE LPIQPDFVGK VVPTRRSERV EVYFQSVDGH EGVALIRPD
|
|---|
| |