| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1316 |
|---|
| Symbol | |
|---|
| ID | 3775509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1346077 |
|---|
| End bp | 1347114 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637799747 |
|---|
| Product | Mn transporter MntC |
|---|
| Protein accession | YP_400333 |
|---|
| Protein GI | 81300125 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.832277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGATGA AGATTACGTT GGGTTCTGCT AAAGCACTGA GTCTGATCTG TGCGACAGCG
CTGCTTTGGG GCTGTCAGCA GCCTGCTAGC CGCGATCGTA ATCAGCCCAA GGTGGTGGCC
ACGACTGCCG TACTCTGCGA CCTCGCGCAG CAAATTGGCA GCGACAGCAT CGACCTCACC
TGCTTGCTGC AACCTGATCA AGATCCCCAC GTCTACACCC CCACACCTGA GGACCGGCGC
GCAGTGGAAG AAGCGCAGCT GGTGCTCTAC GGTGGCTACG ACTATGAGCC ATCCCTCATT
CGCATTGTCC AGGCCACCCA GTCTGCGGCT CCCAAGCTGG CGGTCTACGA AGCTGCCGTG
CCAACCCCTT TGTTGGGGGG AGCGCATGAC CATGACCACG GCGAGAAAGC AGGCGACGAT
CACGGTCACG ATCATGCAGA AGAGAAGACA GCAGCAGCCA CTGCTGACGC CGATCAGACA
CCGGATCCCC ACGTCTGGCA CGATGCCCGC AATGGCATTG CGATCGCCCA AGTGGTCACC
CAAGCCCTGA GTGAGCTCCA GCCCGCTGAA GCCAGCACCT ATCAGCAACG GGAGCAAGCG
ATCGTGGCGG AACTCCAGCA AATTCAAGCC TGGATTCCCC AGCAAATTGC CACGATTCCC
GCCAATCAAC GGCGGCTGAT TACCACTCAC GATTCGTTTG GCTACTATGC CCGCGCCTAT
GGGCTGACAG AATCAGGGGC GATCGCTGGC CTCAGCACCC AAGAGCAACC GACACCGACG
CGCCTGACGG AATTGGTCAA TAGCCTGCGC GCTGCTCAAG TCCCGACTGT TTTCAGAGAG
ACCACTAGCA ATCCCCAGTT GATTGGCACC GTCGCCCAGG AGGCCGGAGT ACAGGTCTCT
GCGCAACCGC TCTACGTGGA AGGCCCGGGT GGCGCTGATT CCCCCGCCCC CAACTACCAG
CAGATGCTGA TCCACAACAC CTGTGCGATC GCGACTGGCT TGGGCGGGCG TTGCCAACCG
CCTCAGCGGC AGTCCTAG
|
|---|
| Protein sequence | MMMKITLGSA KALSLICATA LLWGCQQPAS RDRNQPKVVA TTAVLCDLAQ QIGSDSIDLT
CLLQPDQDPH VYTPTPEDRR AVEEAQLVLY GGYDYEPSLI RIVQATQSAA PKLAVYEAAV
PTPLLGGAHD HDHGEKAGDD HGHDHAEEKT AAATADADQT PDPHVWHDAR NGIAIAQVVT
QALSELQPAE ASTYQQREQA IVAELQQIQA WIPQQIATIP ANQRRLITTH DSFGYYARAY
GLTESGAIAG LSTQEQPTPT RLTELVNSLR AAQVPTVFRE TTSNPQLIGT VAQEAGVQVS
AQPLYVEGPG GADSPAPNYQ QMLIHNTCAI ATGLGGRCQP PQRQS
|
|---|
| |