Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1313 |
Symbol | aspS |
ID | 3775506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1340634 |
End bp | 1342433 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799744 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_400330 |
Protein GI | 81300122 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTC ACTACTGCGG CGAACTTCGT GCCGAGCAAG TTGGCACCTC CGTCACGCTC TATGGCTGGG TCGATCGGCG TCGGGATCAT GGTGGCGTGA TCTTTGTCGA TCTGCGCGAT CGCACAGGCA CGGTGCAAAT CGTTAGTGAT CCAGAACGGA CGCCGGAGTC TTACCACCAA GCCGAAGGCC TGCGCAACGA GTATGTGGTA AAAATCACCG GACGGGTCAG CGGTCGGCCG GCGGAATCCC TCAACCCGAA GCTGCCAACG GGCGAAGTAG AAATCTACGC TGATCGCATT GAAATTCTGA ACGCAGTCCG CCGTCAGTTG CCCTTCCAAG TTTCCAGCGC CGATGAAGAG ACGGTGCGGG AAGATTTGCG GCTGCGCTAC CGCTACTTGG ATCTGCGCCG CGATCGCATG AACCGCAATC TGCAGCTGCG TCACCAAGTC GTCAAGGCGA TTCGCCGCTT CTTGGAAGAT GAAGAACAAT TTATCGAGAT TGAAACACCC GTCCTGACCA AGTCGACGCC GGAAGGCGCA CGGGATTACT TGGTGCCCTC GCGGGTCAAT CCGGGCGAAT GGTTTGCCCT GCCGCAATCA CCGCAGCTGT TTAAGCAACT GCTGATGGTG TCGGGGTTCG ATCGCTACTA CCAAATTGCC CGCTGCTTCC GCGATGAGGA TTTGCGCGCC GATCGTCAGC CGGAATTTAC CCAGCTCGAT ATGGAAATGA GCTTCCTCTC CCAGGAAGAA ATCATCGACC TGAACGAGCG GCTGATTGCT CACATCTTCA AAACAGTGAA GGGTATTGAG CTGCCGCGAC CCTTCCCGCG CTTGACCTAC GCTGAGGCGA TGGATCGCTA CGGCAGCGAT CGCCCCGACA CGCGCTTTGG CCTAGAGCTG GTGGATGTTT CCGATGTCGT TGCGGACATG GGCTTCAAGG TCTTCAGTGG CGCAGTCAAA TCCGGCGGCA AGGTCAAAAT CCTGCCGATT CCCGATGGCA ACGATCGCAT TTCCAACGTG CGGATCAAGC CCGGCGGCGA CATCTTCAAA GAAGCCACGG AAGCCGGTGC TGCCGGTCTG GCCTACATTC GCGTCCGTGA AAACGGCGAG ATCGACACGA TTGGCGCGAT CAAAGACAAC CTCAGTGATG AGCAGAAAGC TGAGATCCTC CGTCGCACTC AGGCACAACC CGGAACGCTG TTGCTATTTG GAGCAGGGAG CACCGACATC GTCAACAAGT CCCTCGATCG CGTCCGCCAA TTCTTGGGTA AAGAGTTGGG ATTGATCGAT CCCGAGGCAC TCAACTTGCT CTGGGTCGTG GACTTCCCGA TGGTCGAGTG GAATGCCGAT GAGAAGCGCT ACGAAGCGCT ACACCACCCC TTCACGGCCC CCAATCCTCA AGATCTAGAA GACCTGACAA CGGCGCGAGC CCAAGCCTAC GACATCGTCC TCAATGGCTT GGAAATTGGC GGCGGTAGTC TGCGGATTTA CCAACGCGAC ATTCAAGAAC GGGTGTTTGA AACGATCGGC CTGTCCCACG AGGAAGCCCA AGCTAAATTT GGATTCCTAC TGGAAGCCTT CGACTTTGGT ACTCCACCCC ACGGCGGCAT CGCCTACGGT CTCGATCGCC TTGTGATGTT GCTGACCGGC GAAGAATCGA TCCGTGATGC GATCGCCTTC CCGAAAACGC AGCAAGCCCG CTGTCTGTTG ACCGAAGCGC CGGCTGATGT CAGCGATCGC CAGCTCAAAG AACTCTACGT CGCCTCCACT TGGCAACCGC CGATCAAAGA ACGCGACTAA
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Protein sequence | MRTHYCGELR AEQVGTSVTL YGWVDRRRDH GGVIFVDLRD RTGTVQIVSD PERTPESYHQ AEGLRNEYVV KITGRVSGRP AESLNPKLPT GEVEIYADRI EILNAVRRQL PFQVSSADEE TVREDLRLRY RYLDLRRDRM NRNLQLRHQV VKAIRRFLED EEQFIEIETP VLTKSTPEGA RDYLVPSRVN PGEWFALPQS PQLFKQLLMV SGFDRYYQIA RCFRDEDLRA DRQPEFTQLD MEMSFLSQEE IIDLNERLIA HIFKTVKGIE LPRPFPRLTY AEAMDRYGSD RPDTRFGLEL VDVSDVVADM GFKVFSGAVK SGGKVKILPI PDGNDRISNV RIKPGGDIFK EATEAGAAGL AYIRVRENGE IDTIGAIKDN LSDEQKAEIL RRTQAQPGTL LLFGAGSTDI VNKSLDRVRQ FLGKELGLID PEALNLLWVV DFPMVEWNAD EKRYEALHHP FTAPNPQDLE DLTTARAQAY DIVLNGLEIG GGSLRIYQRD IQERVFETIG LSHEEAQAKF GFLLEAFDFG TPPHGGIAYG LDRLVMLLTG EESIRDAIAF PKTQQARCLL TEAPADVSDR QLKELYVAST WQPPIKERD
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