Gene Synpcc7942_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1281 
Symbol 
ID3773570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1303144 
End bp1303836 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content57% 
IMG OID637799711 
Producthypothetical protein 
Protein accessionYP_400298 
Protein GI81300090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.582719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTC ATTTGCGTAG CCGCTCTGGC GAAGAAATTG TTCTCTATCT GCGGCCTGGT 
AATCCCTCGG CACCGATTGA GATGGCGGGA CCTGCCAATC TCTGTGGCAC GGTTTCAACC
CTGCTCAAGA TGTCTCTGAC TGGTTTGTCG GCCACGTCCG ACGACTTACT GAGCCTCTGT
GAGTACGATC CAGTCTTTCG CCATTGGTTC CGACTCGACG CTGTTGTCAA AGATGGAGAT
CCAGAGCCAG CCCATCGCGA AGATGCCAAG TTCGCAGCCA TGGAGCCGAT CTATCCATCC
CAAGTGGCGG CCATGCGGCT GGGTGAGCGG CTGACTGCAG CGAGTCTGGT GACAAAGGAG
CAGCTAGACG AAGCCCTGAA AGGCATTCAA GAGCAGATGC CACACCTACA AATTGGGGAA
ATTCTCTGCG GGCGGGGCTA CCTCAGTCAT AGAACCATGG AGTTTTTCCT CGACCCGATC
ACCAAGATGA ACACGGCTTT TTTGACCCTG CGGCTGGGCG AGCGACTACA AGCAGCGGGT
GTCGTCAACG ATCGCGATGT CCATCGCGCC TTGCAATGTC AGCAATGGCT GCCGCTGTCT
CTGGGGCGGC TACTGGTGCT GAACGGCGCG GTTTCGCAGG CCACAGCAGA CTTTTTTGGT
CGGTTGAGCA TTGAGCCGTC CAGCCTGAGC TAA
 
Protein sequence
MRFHLRSRSG EEIVLYLRPG NPSAPIEMAG PANLCGTVST LLKMSLTGLS ATSDDLLSLC 
EYDPVFRHWF RLDAVVKDGD PEPAHREDAK FAAMEPIYPS QVAAMRLGER LTAASLVTKE
QLDEALKGIQ EQMPHLQIGE ILCGRGYLSH RTMEFFLDPI TKMNTAFLTL RLGERLQAAG
VVNDRDVHRA LQCQQWLPLS LGRLLVLNGA VSQATADFFG RLSIEPSSLS