Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1260 |
Symbol | |
ID | 3773549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1283244 |
End bp | 1284071 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799690 |
Product | hypothetical protein |
Protein accession | YP_400277 |
Protein GI | 81300069 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.617614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTGC GTCGTCCGAT AATTGCTGCG ATCGCGGCCT TAGCTTTAAC AGCAGGGCCT GCTCAGGCTC AATTTGACCC GCGTCTGCTC AACCTGCTGC GCGGCGGAAT CCAGCTGTTT CAGGGCCTGA ACTTTAGCAA CCTCAACCCC AATCAAGAGG TGCAGCTGGG GCGGCAAATG AACCAGCAGA TGCTGAGTCA ACGCTTTCGA CCTAATCGCG ATCGCATTTT GGCGGCCTAC GTCAACGATG TAGGTCAACG ACTTGCCGCC GAAAGCGATC GCCCTGATCT GCCTTGGCAA TTCCAGGTGG TGGATAGCCG CGAAATCAAT GCCTTTGCAA CGATGGGTGG CTACGTCTAC ATCACCACGG GGATGCTCGG TTTCCTCAGC AATGAAGCGG AATTGGCCGG CGTTCTCGCC CATGAAATCG GCCATATTGA AGGGCGGCAC TTGCCCCAGC GCTTGGGCCA GAGTTACTTA CAGCAAGCTG GATTGTCTGC TCTGGGTGTC GATAGCGATC GCTTCACTCA AGTTGCCGTT GACTTAGCCC TAAACCGCCC GAACAGTCGC AGCGCTGAGT TTGACGCGGA TGCTCGAGGG CTGCGAATTA TGGAGCGGGC TGGCTATGCT CCTGCAGGCT TGATTTCAGT GATGAACAAG CTGGCCGGCC TTGGCAATAA CGGCATAACC TTCCTCAGCA CCCACCCCGA TTCTCGGGAG CGGGCGCGTG CCTTGACTGC GCAACTGAAT GGCGATCGCA ACCGCATGAA TCAAGGTTTT GGCTTGGATG ATTGGACCTA TCGCCAGCAG GTGCTTGCTC GTCTTTAG
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Protein sequence | MSLRRPIIAA IAALALTAGP AQAQFDPRLL NLLRGGIQLF QGLNFSNLNP NQEVQLGRQM NQQMLSQRFR PNRDRILAAY VNDVGQRLAA ESDRPDLPWQ FQVVDSREIN AFATMGGYVY ITTGMLGFLS NEAELAGVLA HEIGHIEGRH LPQRLGQSYL QQAGLSALGV DSDRFTQVAV DLALNRPNSR SAEFDADARG LRIMERAGYA PAGLISVMNK LAGLGNNGIT FLSTHPDSRE RARALTAQLN GDRNRMNQGF GLDDWTYRQQ VLARL
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