| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1254 |
|---|
| Symbol | |
|---|
| ID | 3773542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1277460 |
|---|
| End bp | 1277855 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799683 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_400271 |
|---|
| Protein GI | 81300063 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000276684 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGT TTGCACCTGC ATCGACCGTC AAAGCACTCC AACGTGACGC GGAAGATCTT
TTGATTCCAG CAGGGAGTGT CATCTTTTCG GAGGGAGAGG CTGCCGCAGA AATGTATGGC
ATTCTTGCCG GTGAGGTAGA GCTCAAGGTG GGCGATCGCA CCGTTGAAGT CCTGCAAGCA
GGTGATGTTT TTGGGGAAGG TGCTCTCGTC CAAGCCCAGA AGTTTCGCGC CACCACTGCG
ATCGCGCGTC AAGACTGCCG ACTGGCTCGT CTCGACCGCC GGCGCTTCCT GTTTGCCATC
CAAGAAACAC CGACCTTTGC GCTGGATGTG ATCCGGAGCT TCTCGCGGCG GCTGCGGGCG
CTGAAGAATG CAAAGCTAAC TACAGCGAGT CACTAG
|
|---|
| Protein sequence | MPMFAPASTV KALQRDAEDL LIPAGSVIFS EGEAAAEMYG ILAGEVELKV GDRTVEVLQA
GDVFGEGALV QAQKFRATTA IARQDCRLAR LDRRRFLFAI QETPTFALDV IRSFSRRLRA
LKNAKLTTAS H
|
|---|
| |