| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1235 |
|---|
| Symbol | |
|---|
| ID | 3773523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1255757 |
|---|
| End bp | 1257946 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799664 |
|---|
| Product | assimilatory nitrate reductase (ferredoxin) precursor |
|---|
| Protein accession | YP_400252 |
|---|
| Protein GI | 81300044 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.117826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TCTCGAAGTT TCTGCCGGTC ATCACTCCAC TCATGATCGA TACCGCCAAA
ACCTTGTGCC CTTACTGCGG TGTGGGCTGT GGACTGGAAG CTGTCCCCCC GGCACAACCC
GGCCGAGCCA CGGTCCGCGA TCGCGAGGGC ACACCGATCT GGCAGATTCG GGGCGATCGG
CAACATCCCT CCAGTCAGGG AATGGTCTGC GTCAAAGGCG CAACGGTGGC GGAATCTGTC
AGCAAAAGCC GGCTGAAATA TCCAATGTTC CGGGCCAGTC TCGACGACCC ATTCACGGAA
ATTAGCTGGG ACGAAGCCCT CGACCGCCTC TGCGATCGCA TCCAACAGAC GCAGGCCGAC
TACGGCAAAG ACGGTATCTG CTTCTACGGC TCCGGCCAGT TTCAAACTGA AGACTACTAC
ATCGCCCAAA AGCTGGTGAA AGGTTGCCTC GGCACCAATA ATTTCGATAC CAACTCGCGA
CTCTGCATGT CCTCAGCGGT GTCGGCTTAC AGTCTTTGCC TGGGTAGCGA TGGCCCACCC
GCCTGCTACG AAGATCTTGA TCTAGCAGAC TGCCTGCTGA TCGTGGGCAG CAATACAGCG
GAGTGCCACC CGATTCTCTT CAATCGCTAT CGCAAGCGCC ATAAACAGGG TGGCACCAAC
CTGATCGTCG TCGATCCACG CTGCACACCA ACGGCTGAGG TTGCCGATCT CCACCTGGCA
CTCAAGCCCG GCAGCGATGT CGCCCTGCTC AACGGCTTGG GCTGGCTGCT CTACCAAATG
GGCTATGTCA AAAAGGACTT CATTGCCAAC CAGACCGAAG GCTTTGAAGA CTGGCTAGCG
ATCATTGAGG ACTATCCACC CCAGCGCACA GCAGAACTGA CGGGACTGGC AGTCGCTGAG
CTGGTGCGAG CCGCCGACTT GATTGCCTCA GCTCAGCGCT GGCTCTCGCT TTGGTCGATG
GGCGTCAATC AGTCGATTCA GGGTACGGCG AAGGCGACCA GCCTGATCAA CCTGCACCTC
TTGACCCGCC AAATTGGTTT ACCAGGCTGT GGTCCTTTTT CCTTAACTGG CCAACCAAAC
GCCATGGGCG GTCGTGAAAC GGGTGGGCTC GCGCATCTGT TACCGGGCTA TCGCAAGGTC
ATCGATCCCC AGCATCGTGC TGATGTGGAG ACGATTTGGG GACTGCCGAT GGGCAGTATT
TCGCCTCAAC CCGGTCGTAC CGCTTGGCAG ATGATCGAAG GCCTGGAGCA GGGTGCAGTG
GGCTTCCTTT GGGTAGCAGC GACCAATCCA GCAGTCAGTC TGCCGGATGT GAAACGGGCT
CAAGCAGCCC TGAAGCGATC GCCTTTTACC GTTCTCCAAG ACGCCTACCA TCCCACCGAA
ACCACAACCT ACGCCCACCT CCTTTTACCC GCTGCTCAAT GGAGCGAGAA AACGGGCACG
ATGACCAACT CCGAGCGGCG AGTGACGCTT TGCCAAGCCT TTCGCCAGCC CCCCGGGGAA
GCCCGAGCCG ATTGGCAAAT TTTTGCGGAA GTGGGACGGC GCTTAGGGTT TGCCTTTGAC
TACACCGATG CGGCTGCCGT CTTTGCAGAG TATGTGCAGG TGACAGCGGG TCGGCTCTGT
GACCTCAGCG GCCTGAGTCA TGAGTTGCTG GCGCAGGCGG GACCTCAACA GTGGCCATTT
CCAGCGGGAG CAGAACCGAC GACCGAAAGT AAGCGCCTCT ACACGAAACA TCACTTTGCC
TATGCCGACG GTCGTGCCCG TTTCCAGCCT TTTCATCACT TGGGAGTAGC AGAGCCACCC
GACGATCGCT ATCCCTTGGT GCTGACAGTG GGACGACTTT ACGGCCACTG GCATACTCAA
ACCCGGACCG GCCGCATCGA CAAAATCAAC AAGCTGCATC CCAGCGCATT TGTCGAAATT
CATCCCCGCG ATGCCGATCG CTACAACATC AGTGAAGGGC AAGCTGTTGT GATTCGATCG
CGACGCGGAG AAGGCTGTTT TCCGGCCAAG GTGACAACGG CAATTTCACC AGGAGTATTG
TTTGTGCCGA TGCATTGGGG GGCACTATGG GGCGATCGCA CGGAGGCTAA TGCCCTCACC
CATCCGGCAG CTTGTCCCAT TTCTGGCGAA CCAGAACTCA AAGCTTGTGC TGTGCAGATT
GAAGCAGCGA GTTCAACCTT CACAATCTAA
|
|---|
| Protein sequence | MFDLSKFLPV ITPLMIDTAK TLCPYCGVGC GLEAVPPAQP GRATVRDREG TPIWQIRGDR
QHPSSQGMVC VKGATVAESV SKSRLKYPMF RASLDDPFTE ISWDEALDRL CDRIQQTQAD
YGKDGICFYG SGQFQTEDYY IAQKLVKGCL GTNNFDTNSR LCMSSAVSAY SLCLGSDGPP
ACYEDLDLAD CLLIVGSNTA ECHPILFNRY RKRHKQGGTN LIVVDPRCTP TAEVADLHLA
LKPGSDVALL NGLGWLLYQM GYVKKDFIAN QTEGFEDWLA IIEDYPPQRT AELTGLAVAE
LVRAADLIAS AQRWLSLWSM GVNQSIQGTA KATSLINLHL LTRQIGLPGC GPFSLTGQPN
AMGGRETGGL AHLLPGYRKV IDPQHRADVE TIWGLPMGSI SPQPGRTAWQ MIEGLEQGAV
GFLWVAATNP AVSLPDVKRA QAALKRSPFT VLQDAYHPTE TTTYAHLLLP AAQWSEKTGT
MTNSERRVTL CQAFRQPPGE ARADWQIFAE VGRRLGFAFD YTDAAAVFAE YVQVTAGRLC
DLSGLSHELL AQAGPQQWPF PAGAEPTTES KRLYTKHHFA YADGRARFQP FHHLGVAEPP
DDRYPLVLTV GRLYGHWHTQ TRTGRIDKIN KLHPSAFVEI HPRDADRYNI SEGQAVVIRS
RRGEGCFPAK VTTAISPGVL FVPMHWGALW GDRTEANALT HPAACPISGE PELKACAVQI
EAASSTFTI
|
|---|
| |