Gene Synpcc7942_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1229 
Symbol 
ID3773517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1250193 
End bp1250987 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID637799658 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_400246 
Protein GI81300038 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0594011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTTA GTGCAGGCGT TTACTTCGTC GGGGTCGGCC CGGGTGACCC GGAGCTAATG 
ACGGTACGGG CTCAAAAGCT GATTGCCGCC GCCGATGTTC TGCTCTACAC CGATTCCTTG
GTGCCCCCGG CAATTTTGGC GGATGCAAGG CCAGACGCAG AACGACTGCC AACGGCCCAT
CGCACGCTGG AAGAGATTTT GCCAATCCTC AAAGAGCGAG TGGCCGCGGG AGCGATCGTG
GCGCGGCTCC ACGACGGCGA TCCCAGCCTC TACAGCACGA TCGCGGAACA GATCGCAGGG
TTGCGATCGC AGGACATTCC CTATCAAGTT ATTCCTGGCG TCAGCGCCTT TCAAGCAGCG
GCCGCTCGAC TCGGGCAAGA ACTGACTTTG CCGGGACTGG TTCAGACGAT CATCCTGACT
CGCTGTGCCG GTCGAATTGG ACTGCCCGAT CGCGAATCCC TCTCGTCCTT AGCCGCGCAT
CAAGCTAGCC TCTGTCTCTA TCTGAGCGCT CGCCAAGCGG AAAAAGCGCA GACGGAATTG
CTGGAACATT ACTCCCCAGA AACGCCGATC GCAGTTTGCT ATCGACTGGG TTGGCCAGAT
GAAGCGATTT GGCTAGGGAA ACTGTCGGAA CTGGCGCAGA TCACTCAAGA TCAGCAACTC
GATCGCACGG TGCTCTATCT GATCAGTCCT GCTTTACAAG CCGTCGAGAC TGGGCGATCG
CAGCTCTACA ATCCCGACTA TCACCATCTG TTTCGGCCAG AAACTACAGC AGCACGATCG
CCCCAGCCAT CATGA
 
Protein sequence
MSFSAGVYFV GVGPGDPELM TVRAQKLIAA ADVLLYTDSL VPPAILADAR PDAERLPTAH 
RTLEEILPIL KERVAAGAIV ARLHDGDPSL YSTIAEQIAG LRSQDIPYQV IPGVSAFQAA
AARLGQELTL PGLVQTIILT RCAGRIGLPD RESLSSLAAH QASLCLYLSA RQAEKAQTEL
LEHYSPETPI AVCYRLGWPD EAIWLGKLSE LAQITQDQQL DRTVLYLISP ALQAVETGRS
QLYNPDYHHL FRPETTAARS PQPS