Gene Synpcc7942_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1220 
SymbolrpmA 
ID3773508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1242067 
End bp1242333 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content56% 
IMG OID637799649 
Product50S ribosomal protein L27 
Protein accessionYP_400237 
Protein GI81300029 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0211] Ribosomal protein L27 
TIGRFAM ID[TIGR00062] ribosomal protein L27 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATA AGAAAGGTAC GGGTAGTACT CGTAACGGGC GTGACTCTAA CGCTCAGCGC 
CTCGGCGTCA AAAAATTCGG TGGCGAAGTG GTGCGCTCGG GCAGCATCAT CGTTCGTCAA
CGGGGTACTA AGTTCCATCC GGGTGTCAAT GTTGGTCGCG GCGGTGACGA CACCCTGTTT
GCACTGATCG ACGGCGTCGT CACCTTTGAG CGCAAAGGCA AAGGCGGCAA GAAAGTCAGC
GTTTACCCTG CTGGCGAAGC TGCTTAA
 
Protein sequence
MAHKKGTGST RNGRDSNAQR LGVKKFGGEV VRSGSIIVRQ RGTKFHPGVN VGRGGDDTLF 
ALIDGVVTFE RKGKGGKKVS VYPAGEAA