Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1199 |
Symbol | |
ID | 3774435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1227303 |
End bp | 1228007 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637799626 |
Product | tRNA/rRNA methyltransferase |
Protein accession | YP_400216 |
Protein GI | 81300008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.354486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCTT TTCTGCTGGA GGGAACGCAC CTCTTGCAGG AGGCGATCGC AACGAACTGG CCGCTATTGC AGGTCTGCGC GACCCCAGCC TGGCAGAATC AACACCCGCA ACTCTGGCAG CAGGCGATCC AAGCGGCACC GGAACAAACG GTGAGTGACG ATTTACTGGC CTATCTCTGC ACTACGGTCA ATCCGGATGG AGTAGTGGCG ATCGCAGCAC GGCAGCCCCA GCGTCAACCG CCCACTTCAG CCTCCTTGCT GATTGCCGTC GAAACCCTGC AGGATCCTGG GAATCTCGGT ACGATCATTC GTACTGCGGC GGCGGCGGGG GCTGATGGTC TCTGGCTGAC TGCAGACGGC GTTGACCCCG ATCATCCCAA GGTGTTGCGT GCCTCGGCGG GGCAATGGTT CCGACTCCCG ATCGCGATCG CCACAGACCT GGGGCAAACC CTACGGAGCT GGCAGCAACA GGGTTATCAG ATTGTCTCGA CGCTGCCGCG AGCGACGACA ACCCTTTGGC AAGCAGACCT CACTCGCCCG ACCGTTCTGT TGCTTGGCAA TGAAGGGGCA GGGCTGAGTC CAGACCTCGC AGCGATTGCG GATTCCGCCG TCACAATTCC CCAAGCGGCG GGGGTGGAAT CTCTGAATGT GGCGATCGCG GCAGCCCTCT TGCTCTACGA AGCCCGCCGT CAGCGACAGA GCTAG
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Protein sequence | MGAFLLEGTH LLQEAIATNW PLLQVCATPA WQNQHPQLWQ QAIQAAPEQT VSDDLLAYLC TTVNPDGVVA IAARQPQRQP PTSASLLIAV ETLQDPGNLG TIIRTAAAAG ADGLWLTADG VDPDHPKVLR ASAGQWFRLP IAIATDLGQT LRSWQQQGYQ IVSTLPRATT TLWQADLTRP TVLLLGNEGA GLSPDLAAIA DSAVTIPQAA GVESLNVAIA AALLLYEARR QRQS
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