Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1163 |
Symbol | |
ID | 3775113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1195317 |
End bp | 1196492 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799589 |
Product | hypothetical protein |
Protein accession | YP_400180 |
Protein GI | 81299972 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.38877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCG TCGCTCAGTC ATCACCGCCA CTTTGGATCA GTGTGGCGAT CGCCTTCTAT GCCTTCATCA GTATCGGTTT AGCAGAAGCC AGTCTTGGTG TCCTGTTGCC CTCAATTCTG GCGGAGTATG GGCTGACCTC AGCCACGATC ACGCTGCTGT TTATCAGTCA GATCTGTGGC TACATCCTCG CGGCGATCGC CAGCAGTTTG GTCATGGCAC GACTAGGGCT AGGACGATTG CTGGTCTTGG CTGCAAGTCT GCTAACCGCC GCACTACTGA TTTATGCCCT CGTTCCGGCT TGGCTACTGA TGGTGCTGGC GGGGCCACTG CTGGGCATGG GCATTGGGTT GATTGATGCA GGCATCAACA CAACGCTGGT GCAGGACGAT CGCACGGCGC ATTTGCTGGG AGCGCTGCAC GGCTTCTATG GCATTGGCGC TTTTGCCGGG CCTGCGATCG CGACCACACT GTTGGCTTTG GGCTTGGAGT GGCGGCAAGT CTACAGCGTT CTCGCCATGC TCACTAGCTT GCTTCTGGTG GGCGTATTGG CGGCGCTCTT CTATCGCTAC CCGCCCCTGC TCAAGAATCC AGACCTGCTT GCCGCCTCTG CCGATGTGCA ACTTCGGCGA TCGCTCCGCA CCCCGATCGT GTTCTTGTTT GGGGCATTTC TGCTGATCTA TGTCGGCATC GAAGCCTCGG TTAGCCACTG GGCTTACAGC GTCCAAACGA TCGCTCGGGC AACACCAGCT CTTTGGGCAG GCTATGGCCT GAGTGCCTAC TGGCTGGGAT TGACGGCAGG TCGATTCTTG CTGAGCTACA GCTTGCGATC GCTGGGTGGA CTCCGCACCA TTACCCTCTC ACTGGGCTTG CTGATGGTTG GGCTGATTGG CTGGTGGCAG CAGCCTCAGT CGCTGATCAG TTTGCCGTTA ATTGGCTTTG CGCTGGCTGC CATTTTCCCC ACCATCATCT GGCTGATTCC CAAACGCCTA CCAGAAGGCT TGGTTCCAGC GACGGTTGGT TTTGCAACCA GTGCGGCCAG TGTGGGGTCA GCACTGATTC CGGCCGGAAT CGGCTGGGTT GCTAGTGGTG CTGGCTTAGC AGTGGTGCCG CTACTGATTC TGCCGCTGGC GATCGCCATG GGCGGTTTGC ATGGCCTGTT GCTGCGATCG CAGTGA
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Protein sequence | MRLVAQSSPP LWISVAIAFY AFISIGLAEA SLGVLLPSIL AEYGLTSATI TLLFISQICG YILAAIASSL VMARLGLGRL LVLAASLLTA ALLIYALVPA WLLMVLAGPL LGMGIGLIDA GINTTLVQDD RTAHLLGALH GFYGIGAFAG PAIATTLLAL GLEWRQVYSV LAMLTSLLLV GVLAALFYRY PPLLKNPDLL AASADVQLRR SLRTPIVFLF GAFLLIYVGI EASVSHWAYS VQTIARATPA LWAGYGLSAY WLGLTAGRFL LSYSLRSLGG LRTITLSLGL LMVGLIGWWQ QPQSLISLPL IGFALAAIFP TIIWLIPKRL PEGLVPATVG FATSAASVGS ALIPAGIGWV ASGAGLAVVP LLILPLAIAM GGLHGLLLRS Q
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