Gene Synpcc7942_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1162 
Symbol 
ID3775112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1194846 
End bp1195301 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content56% 
IMG OID637799588 
Producthypothetical protein 
Protein accessionYP_400179 
Protein GI81299971 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.457747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTT TGATTGCATT ACTGGGTGCT GGATCGGGCG GCGGGTTGCT ATCCATAGGA 
GCGGCAGCCA ACGCTCGACT GAAGCAAACG CTGCGGTCTC CCATTGCAGC AACAGCCATC
AACTTCATCG TCGGCTCCAG TACCCTGTCG CTGCTCTTAG TGCTGGGTGT GTTTGGTGCT
CAATCCCTCG ATCACCTTGG ACAAGTGCCG ATCTGGGCAT TTTGTGGAGG TGGCCTTGGA
GCCGTCTACG TGACCCTGAA TACGCTGGTC ATTGGCAGGC TAGGGCTCAC GACCACGATG
CTCGCGGTGG TCTGCAGTCA GTTGGTGATG TCCTTGGTTA TTGACCAATG GGGTTGGTTT
GGCCTTACCC CTCAACCGAT CAGCCCGTCT CGCGTTGTTG CGATTGGTCT GTTGCTGGTC
GCCGTTACGC TGACCCATTT AGACCGCGAT CGCTAA
 
Protein sequence
MDVLIALLGA GSGGGLLSIG AAANARLKQT LRSPIAATAI NFIVGSSTLS LLLVLGVFGA 
QSLDHLGQVP IWAFCGGGLG AVYVTLNTLV IGRLGLTTTM LAVVCSQLVM SLVIDQWGWF
GLTPQPISPS RVVAIGLLLV AVTLTHLDRD R