Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1162 |
Symbol | |
ID | 3775112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1194846 |
End bp | 1195301 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799588 |
Product | hypothetical protein |
Protein accession | YP_400179 |
Protein GI | 81299971 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.457747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTT TGATTGCATT ACTGGGTGCT GGATCGGGCG GCGGGTTGCT ATCCATAGGA GCGGCAGCCA ACGCTCGACT GAAGCAAACG CTGCGGTCTC CCATTGCAGC AACAGCCATC AACTTCATCG TCGGCTCCAG TACCCTGTCG CTGCTCTTAG TGCTGGGTGT GTTTGGTGCT CAATCCCTCG ATCACCTTGG ACAAGTGCCG ATCTGGGCAT TTTGTGGAGG TGGCCTTGGA GCCGTCTACG TGACCCTGAA TACGCTGGTC ATTGGCAGGC TAGGGCTCAC GACCACGATG CTCGCGGTGG TCTGCAGTCA GTTGGTGATG TCCTTGGTTA TTGACCAATG GGGTTGGTTT GGCCTTACCC CTCAACCGAT CAGCCCGTCT CGCGTTGTTG CGATTGGTCT GTTGCTGGTC GCCGTTACGC TGACCCATTT AGACCGCGAT CGCTAA
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Protein sequence | MDVLIALLGA GSGGGLLSIG AAANARLKQT LRSPIAATAI NFIVGSSTLS LLLVLGVFGA QSLDHLGQVP IWAFCGGGLG AVYVTLNTLV IGRLGLTTTM LAVVCSQLVM SLVIDQWGWF GLTPQPISPS RVVAIGLLLV AVTLTHLDRD R
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