Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1161 |
Symbol | |
ID | 3775111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1194348 |
End bp | 1194842 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799587 |
Product | hypothetical protein |
Protein accession | YP_400178 |
Protein GI | 81299970 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.275769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTGC TCCGTTCCAG TTGGCGGCAG ATTGCTGCTC GCTGCCAAGT CTGTTTGTTT CTGGGGCTGG CTCTGCTCAG TGGCGCCATC CTGCCAATTC AAGTCAGTTG CAATGCTCAG CTGGCGCGAT CGCTCGACTC TGTCCCTCTG GCGGCGACGC TCTCTTATGT GACTGGCACT GTTGTTCTTG TCAGCCTGCT ACTCAGCGGT CGGTTTGGAC GCCCGCGCTG GTCTGCGATC GCCCACGCGC CTTGCTGGAG TTGGCTTGGG GGTGTACTGG GGCCTTGGTA CGTCCTTTCG AGTACGCACT TCGCCTCTGT TCTGGGCACC ACCCTGACAC TCGGCCTGGT GGTCAGTGGA CAGGCGATCG TCAGCGTCAT CACGGATCAC TACGGCTGGC TGAATGTGCC TCGGCATCGC CTGACACCCC TGCGGCGGGC GGCTTTGGGG CTATTCGCGA TCGCTCTCTT CTTTCTGTTG CAACCGAGGG CTTAA
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Protein sequence | MILLRSSWRQ IAARCQVCLF LGLALLSGAI LPIQVSCNAQ LARSLDSVPL AATLSYVTGT VVLVSLLLSG RFGRPRWSAI AHAPCWSWLG GVLGPWYVLS STHFASVLGT TLTLGLVVSG QAIVSVITDH YGWLNVPRHR LTPLRRAALG LFAIALFFLL QPRA
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