Gene Synpcc7942_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1161 
Symbol 
ID3775111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1194348 
End bp1194842 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content60% 
IMG OID637799587 
Producthypothetical protein 
Protein accessionYP_400178 
Protein GI81299970 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.275769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGC TCCGTTCCAG TTGGCGGCAG ATTGCTGCTC GCTGCCAAGT CTGTTTGTTT 
CTGGGGCTGG CTCTGCTCAG TGGCGCCATC CTGCCAATTC AAGTCAGTTG CAATGCTCAG
CTGGCGCGAT CGCTCGACTC TGTCCCTCTG GCGGCGACGC TCTCTTATGT GACTGGCACT
GTTGTTCTTG TCAGCCTGCT ACTCAGCGGT CGGTTTGGAC GCCCGCGCTG GTCTGCGATC
GCCCACGCGC CTTGCTGGAG TTGGCTTGGG GGTGTACTGG GGCCTTGGTA CGTCCTTTCG
AGTACGCACT TCGCCTCTGT TCTGGGCACC ACCCTGACAC TCGGCCTGGT GGTCAGTGGA
CAGGCGATCG TCAGCGTCAT CACGGATCAC TACGGCTGGC TGAATGTGCC TCGGCATCGC
CTGACACCCC TGCGGCGGGC GGCTTTGGGG CTATTCGCGA TCGCTCTCTT CTTTCTGTTG
CAACCGAGGG CTTAA
 
Protein sequence
MILLRSSWRQ IAARCQVCLF LGLALLSGAI LPIQVSCNAQ LARSLDSVPL AATLSYVTGT 
VVLVSLLLSG RFGRPRWSAI AHAPCWSWLG GVLGPWYVLS STHFASVLGT TLTLGLVVSG
QAIVSVITDH YGWLNVPRHR LTPLRRAALG LFAIALFFLL QPRA