Gene Synpcc7942_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1146 
Symbol 
ID3775096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1171215 
End bp1171481 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content54% 
IMG OID637799572 
Producthypothetical protein 
Protein accessionYP_400163 
Protein GI81299955 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCCCA TGGTCACGCC CGAACAAGTA GAGTCAATGA TCTGTGCCCA AATTCCCGAT 
GCACAGGTGA TGGTGAACGA CCTGACCGGG GGAGGCGACC ACCTACAAGT GACGGTTGTT
TCGTCTGCTT TTGCTGGTAA AAGTCTCATT AAGCAGCATC AGCTGGTCTA TGGAGCGGTT
CAAGCCGCAA TGTCAACGGA GGCGATTCAC GCGCTAGCGC TGAAGACCTA TACCCCCGAT
CGCTGGCTGA ATGAAGCACA GGGCTAA
 
Protein sequence
MQPMVTPEQV ESMICAQIPD AQVMVNDLTG GGDHLQVTVV SSAFAGKSLI KQHQLVYGAV 
QAAMSTEAIH ALALKTYTPD RWLNEAQG