Gene Synpcc7942_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1144 
Symbol 
ID3775094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1169424 
End bp1170455 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content59% 
IMG OID637799570 
Producthypothetical protein 
Protein accessionYP_400161 
Protein GI81299953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC GATCGGGCCA GCTTTGGTCT GCATTACTGT TAGCCCTCAG TTTGGGGCTA 
ACGGCCTGCC AAGAGCCCCC GCCAGCGCCT CCACGCGCTG AACGACCCGA TCTCAGTTTC
ACGGACTTTA CCCTGCGGCA GGCCAATCCC ACCGGCAAGC CTGCTTGGGA ACTGCGGACT
CCTCAGATTG TCTATAACAG CGACAAAAGT GCGGCGCAGC TAACCAAGCC CCTCGGCTTT
CTCTACGATG AAAGCGGCAA GGTGCTCTAC GAAATCGAGG GCGATCGCGG CTCGATTGAG
GGCGAAAACG CCGAGATCAT TCGCATCAGT GGCAATGTCA TCGCTCGCCA AAAACAGGCA
CCGGGGGCGG TTCTCAAGGG TGAGGAGCTG GAGTGGCGGC CCAATCAGCA AACCTTTGAT
CTCAGACGCA ACGTCATTGG TACCTATCGC GATGTGGTGC TCAAGGGCAA AGAAGGCCGG
TTTGATGTCC GTCAGCAACA GTTGGAATTG ATCGGGCCGA TGGTAGCGAC CCTTAAGCAA
GGGGAGATTC TGTCGGAGTT ACGAACCAGC TCGCCCCGCT GGCTCTTAGC TGAGAAACGC
TTGCTGGCCC CCAATCCGCT CCAGGCTGAA CGCCGCGATC GCAGTCAGCT CAAGGGACAA
GGGCGATCGC AACGGGGGGA ACTTCTCCTC GATCCACAAA TTTTGATTCT GCAGCAGCAG
GTGGAGGTCG ATGCTCTGGA TCCCGTTGCC CAGTTGCGGG GTGAAGATTT GCGCTGGAAT
CTACCTCAAA ACTTGGTCGA CAGCCCGGTC GCGGTCCAGG GCTTCTACCC AGCTGAGCAG
ACCACAGTTC GGGGCGATCG CGGGCAGGCC AATCTCAATG CCCAGTTGAT TCAACTAGAA
GGCAACGCCG AAAGCTTCTC CGCGAAGGAT CAAGCGCGCC TCCAAGCCAA TCGCCTGATC
TGGAATCAGA AGACTGCTGA AGCGACAGCG ATCGGGGGAG CGCGCTACCA GCGATCGCGG
CTCTCGCTCT AG
 
Protein sequence
MTLRSGQLWS ALLLALSLGL TACQEPPPAP PRAERPDLSF TDFTLRQANP TGKPAWELRT 
PQIVYNSDKS AAQLTKPLGF LYDESGKVLY EIEGDRGSIE GENAEIIRIS GNVIARQKQA
PGAVLKGEEL EWRPNQQTFD LRRNVIGTYR DVVLKGKEGR FDVRQQQLEL IGPMVATLKQ
GEILSELRTS SPRWLLAEKR LLAPNPLQAE RRDRSQLKGQ GRSQRGELLL DPQILILQQQ
VEVDALDPVA QLRGEDLRWN LPQNLVDSPV AVQGFYPAEQ TTVRGDRGQA NLNAQLIQLE
GNAESFSAKD QARLQANRLI WNQKTAEATA IGGARYQRSR LSL