Gene Synpcc7942_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1130 
Symbol 
ID3775080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1149445 
End bp1151259 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content58% 
IMG OID637799556 
Productprotein serine/threonine phosphatase 
Protein accessionYP_400147 
Protein GI81299939 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA ATTTTCTCGC AGAGCACTAT ACGTTGCCGC GTCAAGTTGA GCCACTTGCC 
AATCGGTTTC TTTGGGTCAG TGGAGCCGCT GCAGCACAGG TGCCCCCAGG AACGAGGGTG
AGCGATCGCT ATCAAGTTGT AGCGCCCCAA ATTTGGTTTG ATCTGGATCC TGATCGCCCG
CCTCAGCTCC CAGAGCATCT ACCGGAATCT CTGCAACCCT ACCTCTGGCT GTTTGAGCAC
CAGCGGCACC TACCCACTCT CTATGCGCTG GTGCCCTTAG AGGATGGTGA AACAGCAATT
CTGCTCGAGC GCGTTCCCCT CAATCGCGAA GGTCATCTCT GGCCCAGTCT TGTCAATGCG
CTTAAGACAG CTTCAACGGC CCTCCAAATT CACTGGATTG AGCAGATCCT GCTGTTGTGG
GAGCCCCTGA TCTGCCAAGG CGTGGCTAGT AGTGTCCTGA AATTGATGAA TATCCGCGTT
TGTGCGGGTG AGTTGCGCCT GCTGGAGTTG CTGGACGACC ATGAGAATCC ACTGGGGATA
GCTAATCCCC AAGAGACTGA GCCAGCCAGT TTGCGCCGTT TGGGACAGGT CCTCAAGAGC
CTCTTGCCGC TGTTGCATCC CGAGGCTGCC GCTGCGATCG CCCCAATGGT GCAGCGCCTC
CAAACCCCAG AGGCTGATTT AGCCGAGAGT CAGGCCATCC TCCGGCAGGC GTGGCAGCAC
TACAGCCAGC AGCAGTCTTT GACAGTAGAG GCCATCGCCC TGACTGACCC CGGCTGGCGC
GGCGGCGATA ACGAAGACAG TTGCTATCCC CTAGCAGCCG ACCTTGCTGA ATCACCACAG
CCAGATTGGA TTGCGGTCTG TGATGGTCTC GGTGGTCATG TGGGTGGGGA AGTAGCCAGC
CAAACTGCGA TCGCTGGTCT TAAACTCCAA GTCCCGCAGC TATTGGAGCA TCGTCAAGCG
CCCGAACGAC CTGTGGAGAG CCTGGCTGAG CAACTGCGCA TCAGCCTGCG GATCATTAAC
GATCTGATCG CCAGCCGCAA CCAACAAGAT GCAGAAGTCT TAGCCCGCAT GGGGACAACC
CTCGTTCTGG CTTTGAAAAC ACCAGGACCC CAGCCCGAGC TGACAATCGC CCACATTGGG
GATAGCCGCG CCTATTGGTT GACTCCCCAC CTGACAGAGC GACTCACCCT TGACCACGAT
GTCGCTACTC AGACAGTGAC TCAGGGCTTT CTAGCCTATC GTTCGGCCCT GCGCTTAACG
CAAGGGGCTG CCCTCTCCCA GGCGATGGGG GTGATGGCTT CGACGGGACT GCAGATCCCT
GTTCAATCCT TTCGCGTCCT CGAGCCAGGC ATTTTGCTGC TCTGCTCAGA TGGTCTGAGT
GACTACGGTC TGGTTGAGAC CTTTGGCCAT GTAGATGTGG GTGCTGTGCT CCGAGGGGAA
TTATCGTTGG CCGACTGGGG CCAGCGCTGG ATCGATCGCG CCCGCCAGCT GACCGGACAC
GACAATATTT CAGTGGCAGC ATTCTGTTGC CAACTGACGG AGGTCGCACC GAGCCTAATC
AGTCCAGTTG TGTCGCCACC ATTGGAGCTG CCACTCGCCA CCGCCACCGT TCAGGAACCT
AAGCCTGCGG ACACAGTAGT AGCTCCTGAG ATCGTGGATC GAGCGGTTGA ACCTAGCTTC
AATCTCTCTT GGCGAACTTG GCTGGGGGCG ATAGCCCTTG CCATGCTTTT AGGTGCTGGC
ATTGGCTTGA TTGTCCCGGC TCCAACGCAG CCAACTCCCA ACCTAGGTGT TCCAGTCGGG
CCCAGCGATC GTTAA
 
Protein sequence
MTQNFLAEHY TLPRQVEPLA NRFLWVSGAA AAQVPPGTRV SDRYQVVAPQ IWFDLDPDRP 
PQLPEHLPES LQPYLWLFEH QRHLPTLYAL VPLEDGETAI LLERVPLNRE GHLWPSLVNA
LKTASTALQI HWIEQILLLW EPLICQGVAS SVLKLMNIRV CAGELRLLEL LDDHENPLGI
ANPQETEPAS LRRLGQVLKS LLPLLHPEAA AAIAPMVQRL QTPEADLAES QAILRQAWQH
YSQQQSLTVE AIALTDPGWR GGDNEDSCYP LAADLAESPQ PDWIAVCDGL GGHVGGEVAS
QTAIAGLKLQ VPQLLEHRQA PERPVESLAE QLRISLRIIN DLIASRNQQD AEVLARMGTT
LVLALKTPGP QPELTIAHIG DSRAYWLTPH LTERLTLDHD VATQTVTQGF LAYRSALRLT
QGAALSQAMG VMASTGLQIP VQSFRVLEPG ILLLCSDGLS DYGLVETFGH VDVGAVLRGE
LSLADWGQRW IDRARQLTGH DNISVAAFCC QLTEVAPSLI SPVVSPPLEL PLATATVQEP
KPADTVVAPE IVDRAVEPSF NLSWRTWLGA IALAMLLGAG IGLIVPAPTQ PTPNLGVPVG
PSDR