Gene Synpcc7942_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1119 
Symbol 
ID3775069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1136617 
End bp1137294 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID637799545 
Producthypothetical protein 
Protein accessionYP_400136 
Protein GI81299928 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTATGC TCCTTTCAGC GATCGCGCCA GCTTCAATCA GTGTCTGGAA TCTGCAAGCA 
GTGCTTCAGG GGGTATTGGA AAGCATTGGT AATCTTGGGC CGTGGGCTGC GATCGCTTTC
ATTGGTTTCT ATGCCATTGC GACGATCGCT TTTGTTCCTG GCGCAATTCT GACCCTAGGC
GGCGGAGTTC TATTTGGTTT GGTTTGGGGC TCGCTCTATG TTTTTGTTGG GGCCACGCTT
GGAGCGATCG CTGCTTTTTT GATCGGGCGA TATCTAGCGC GGAGTTGGAT CTCTCGTCAA
CTAGCGAGTT ATCCAAACTT TGCAGCGATT GATCGTGCAG TGGGAAAAGC AGGCTTAAAA
ATTGTCTTTC TGACTCGGCT TTCACCGCTG TTCCCTTTTA ATTTTTTGAA TTATGCCTAC
GGTGTGACCA GCGTAACGCT CAGAGATTAC GCCTTAGCGT CGATAGGGAT GGTTCCTGGC
ACCATTTTGT ACGTCTATCT AGGTTCGTTG GCTGGCAATA TTGCCACACT GAGTTTGAGC
GATCGCCCTC AACAGACAGT CTTAGGATGG GTCATTAATT TGATTGGTTT AGGCGCAACT
ATTGTTGTGA CAATCTATGT CACGCGACTA GCTCGCCACT CATTACAAAC GGTTGTGAAC
CCCCAGGGAG ATCAATAG
 
Protein sequence
MPMLLSAIAP ASISVWNLQA VLQGVLESIG NLGPWAAIAF IGFYAIATIA FVPGAILTLG 
GGVLFGLVWG SLYVFVGATL GAIAAFLIGR YLARSWISRQ LASYPNFAAI DRAVGKAGLK
IVFLTRLSPL FPFNFLNYAY GVTSVTLRDY ALASIGMVPG TILYVYLGSL AGNIATLSLS
DRPQQTVLGW VINLIGLGAT IVVTIYVTRL ARHSLQTVVN PQGDQ