Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1119 |
Symbol | |
ID | 3775069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1136617 |
End bp | 1137294 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637799545 |
Product | hypothetical protein |
Protein accession | YP_400136 |
Protein GI | 81299928 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTATGC TCCTTTCAGC GATCGCGCCA GCTTCAATCA GTGTCTGGAA TCTGCAAGCA GTGCTTCAGG GGGTATTGGA AAGCATTGGT AATCTTGGGC CGTGGGCTGC GATCGCTTTC ATTGGTTTCT ATGCCATTGC GACGATCGCT TTTGTTCCTG GCGCAATTCT GACCCTAGGC GGCGGAGTTC TATTTGGTTT GGTTTGGGGC TCGCTCTATG TTTTTGTTGG GGCCACGCTT GGAGCGATCG CTGCTTTTTT GATCGGGCGA TATCTAGCGC GGAGTTGGAT CTCTCGTCAA CTAGCGAGTT ATCCAAACTT TGCAGCGATT GATCGTGCAG TGGGAAAAGC AGGCTTAAAA ATTGTCTTTC TGACTCGGCT TTCACCGCTG TTCCCTTTTA ATTTTTTGAA TTATGCCTAC GGTGTGACCA GCGTAACGCT CAGAGATTAC GCCTTAGCGT CGATAGGGAT GGTTCCTGGC ACCATTTTGT ACGTCTATCT AGGTTCGTTG GCTGGCAATA TTGCCACACT GAGTTTGAGC GATCGCCCTC AACAGACAGT CTTAGGATGG GTCATTAATT TGATTGGTTT AGGCGCAACT ATTGTTGTGA CAATCTATGT CACGCGACTA GCTCGCCACT CATTACAAAC GGTTGTGAAC CCCCAGGGAG ATCAATAG
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Protein sequence | MPMLLSAIAP ASISVWNLQA VLQGVLESIG NLGPWAAIAF IGFYAIATIA FVPGAILTLG GGVLFGLVWG SLYVFVGATL GAIAAFLIGR YLARSWISRQ LASYPNFAAI DRAVGKAGLK IVFLTRLSPL FPFNFLNYAY GVTSVTLRDY ALASIGMVPG TILYVYLGSL AGNIATLSLS DRPQQTVLGW VINLIGLGAT IVVTIYVTRL ARHSLQTVVN PQGDQ
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