Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1116 |
Symbol | pgk |
ID | 3775066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1132968 |
End bp | 1134176 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799542 |
Product | phosphoglycerate kinase |
Protein accession | YP_400133 |
Protein GI | 81299925 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.206718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAAAA GAACTTTAGC AAGCCTGACC GCCGCTGACT TAGAGGGCAA GCGGGTCCTC GTGCGTGTCG ACTTCAATGT CCCTTTGGAC GGCAATGGGA AAATTACGGA TGACACCCGC ATCCGTGCGG CTCTGCCGAC GATTCGCTAC CTGTCGGAAA GTGGTGCCAA GGTGATTCTG GTCAGCCACT TTGGTCGTCC CAAAGGCAAG CCCGTCGAGA GCATGCGCTT AACGCCGGTG GCTGAGCGCC TCTCGGAATT GCTGGGTCGC CCTGTTGTTA AGACAACCGA TGCTGTGGGT GCCGGTGCCG AAGCGCAAGT GGCAGCCACC AGCAATGGCC AAGTCGTGTT GTTGGAGAAC GTGCGTTTCC ACGCTGAGGA AGAAGCCAAC GACGCTGAAT TTGCGAAAGC ACTAGCTAGC TTGGCCGATA TCTACGTCAA TGATGCCTTT GGTGCTGCTC ACCGGGCTCA CGCTTCCACG GCTGGCGTGA CTGAATATCT TTCGCCTTGC GTGGCTGGTT ACCTGTTGGA GAAAGAGTTG CAATACCTAC AAGCCGCGAT CGACAATCCC CAACGGCCCT TGGCTGCGAT CGTCGGCGGT TCGAAAGTTT CCAGCAAAAT TGGCGTGATC GAAACGCTGC TGGATAAGTG CGACAAACTG CTGATTGGTG GCGGCATGAT CTTTACCTTC TACAAAGCCC AAGGACTTTC GGTCGGCGGC TCACTGGTAG AAGAGGACAA ACTCGATCTG GCGCGATCGC TGATGGCTAA AGCGCAAGAA AAAGGCGTGC AACTGTTGCT GCCCGTGGAT GTAGTAGTGG CCGATAAGTT TGCGCCGGAT GCTAATGCCA AAACCGTGGC GATCGATGCG ATTCCCGATG GCTGGATGGG CCTAGATATC GGACCTGAGT CGGTCAAGCA ATTCGAGGAA GCCTTGGCCG ATTGCCGCTC GGTCATTTGG AATGGCCCGA TGGGCGTATT TGAGTTCGAT CAATTCGCTG TCGGTACCGA AGCGATCGCT CGTAGCTTGG CAGGACTGAC CCGCAAGGGT GCAACCACGA TCATTGGTGG TGGTGACTCG GTCGCTGCCG TTGAGAAAGT CGGTGTTGCT TCGGAAATGA GCCACATTTC CACCGGTGGT GGTGCCAGCT TGGAACTGCT GGAAGGCAAA GTCCTGCCGG GTGTGGCTGC ACTGGATGAC GCTGCCTAA
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Protein sequence | MSKRTLASLT AADLEGKRVL VRVDFNVPLD GNGKITDDTR IRAALPTIRY LSESGAKVIL VSHFGRPKGK PVESMRLTPV AERLSELLGR PVVKTTDAVG AGAEAQVAAT SNGQVVLLEN VRFHAEEEAN DAEFAKALAS LADIYVNDAF GAAHRAHAST AGVTEYLSPC VAGYLLEKEL QYLQAAIDNP QRPLAAIVGG SKVSSKIGVI ETLLDKCDKL LIGGGMIFTF YKAQGLSVGG SLVEEDKLDL ARSLMAKAQE KGVQLLLPVD VVVADKFAPD ANAKTVAIDA IPDGWMGLDI GPESVKQFEE ALADCRSVIW NGPMGVFEFD QFAVGTEAIA RSLAGLTRKG ATTIIGGGDS VAAVEKVGVA SEMSHISTGG GASLELLEGK VLPGVAALDD AA
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