Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1107 |
Symbol | |
ID | 3775057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1124289 |
End bp | 1125089 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799533 |
Product | TPR repeat-containing protein |
Protein accession | YP_400124 |
Protein GI | 81299916 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.684682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACAG CCATGCGCAG CGTTGCTTGG GGATTGGCGA TCGCACTCTG GCCCATCGCT GTTTGGGCAG AAAATCCCGA AGACCTACAG CGATTGCTGA CGACTCGCCA GTGTGAACGC TGTGATCTCC AAGACTCTGG CCTAGTGCTG GCCCGACTCT CAGGGGCCCG CTTGACCGGC AGCAATCTGC AGCGAGCCAA TCTGAGCGGT GCTGACTTGA GCGGAGCCGA CCTGCGCCAA ACGGATTTGC GCGGGGCGTC GCTACAGCGG GCCAATCTTG CCGGCGCCAA TCTGACTGGG GCACGCCTCG ACGGAGTTGA CCTGCGGGAG GCTTGGTTGA CAGAGGCAAT TCTGACGCCG CAGCAGTTGG CCTTGGCCCA CATTCAGGGT GCTCAAGGAT TGGATGTAAC CGCGCTGCCT TTTGAACGCT ATCAAGCTTG GGGCATTGAG GCGATTCAGG CGGGTCGATT TGAGCGTGCC ATCAGTTATT TCGACCTCGC TCTCCAACGC AATCCCAAAT CTGCCTCCAC CTATCTCAGC CGCGCGATCG CCTATCAAGG TCTGGGGCGA TCGGAACAGG CGATCGCCGA TGCCCAAGCA GCAGAGCAAC TCTACAAAAG TCAGCAAAAT CCGGAAGGCG AAAAGCGATC GCAGGAACTG CGCACCACCA TCGTTGCGGC TCAAGAACGG GTCGCCAGCA GTGGCAGCAA TGGCGGTAAC GGGGGCGGGA GTGCAGCCTT GGCCGTGCTG ACGGGCATTG TCCAAGGGGT GCTGCCCTTC TTACTGGGCT TCCCCTTCTA G
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Protein sequence | MGTAMRSVAW GLAIALWPIA VWAENPEDLQ RLLTTRQCER CDLQDSGLVL ARLSGARLTG SNLQRANLSG ADLSGADLRQ TDLRGASLQR ANLAGANLTG ARLDGVDLRE AWLTEAILTP QQLALAHIQG AQGLDVTALP FERYQAWGIE AIQAGRFERA ISYFDLALQR NPKSASTYLS RAIAYQGLGR SEQAIADAQA AEQLYKSQQN PEGEKRSQEL RTTIVAAQER VASSGSNGGN GGGSAALAVL TGIVQGVLPF LLGFPF
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