Gene Synpcc7942_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1091 
Symbol 
ID3775041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1108372 
End bp1109535 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content59% 
IMG OID637799517 
Producthypothetical protein 
Protein accessionYP_400108 
Protein GI81299900 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.25042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.18713e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTCAGG CTATCCCCGA TCGCCTCTTA GAATGGTTGG AAAGCCAGCC CCAGCGCCGC 
TTGACGATGG CGCAGTTTAT GAGCTGGGCG CTCTACGATC CCGAGTCGGG CTACTACAGC
AGCCGCACCG GGCAATTTGG CGATCGGGGT GATTTTGTCA CATCCCCCTC GCTTTCAGCT
GATTTTGCCG AATTGCTGGC GGTACAAGCC GCAGAGTTTT GGCAAGTTCT CGGACGACCC
GATCGCTTTG TTTGGGTCGA GATGGGGGCG GGCGCTGGCC AGTTTGCAGG GGACTTTTTA
GCAGCGATCG CCGGAACCGA GTTAGAAGCA ACGTTGCACT ATCGCATCAT TGAGCGATCG
CCCCAACTGC GGCGGCAGCA GCAAGAGCGA CTAGAACCCT GGCGCGATCG CGTCGATTGG
TGGACTTGGG AAGACTGGGC CACTCAGCCA ACCGTCGGTG TGGCTTTCTC GAATGAGCTA
GTGGATGCCC TGCCGGTGCA TCGGATCCAG TGGCAAGGGG GTGAATGGCA AGAAATTTAT
GTGACGGAAA ATGCGGGGGT TCTGCAAGAA GTCTTGGGAC CGCTGTCGAG CCCTGACCTT
GTTGATGTCT TTGCAGACTT GGGATTGGCA GCGGCGATCG CACGTCTGCC CGAGGGCTAC
CGAACGGAGG TGCATCCGGC GGCGAAGCAG TGGCTCGCTC AGGTCGTTCA GGGATTGCAG
CGGGGCTACT TGCTGACGAT CGATTACGGC TACAGCGGCG ATCGCTACTA CGCGGCTGGC
CGCACGGATG GCACCCTTCA GGCCTACTGG CAGCAACGCT TTCACAACGA TCTCTATGCT
CGGCCGGGGC AGCAAGATCT GACGGCCCAT GTCAATTTTT CAGCGCTGGA AGTCTGGGGC
GAAGCGCTCG GGCTCAAACG CTTGGCCTTT ACGGAACAGG CTCTGTTTCT GATGGCGCTG
GGCTTGGGCG ATCGCCTCAT GGCACTCTCC CAACCACAGT CCGGATCAGA CCTGAGTCAG
TTGTTACGGC GACGCGAAGT GCTACACCGG TTGCTCGATC CCACCGCACT CGGAAACTTT
GGGGTCTTGT TGCAAGGGCT CAACCTCAGT CCTGAAGAAC GAGCACAATC GTTACGTGGC
TTCACAGTTC CAGCAAGCTT GTAA
 
Protein sequence
MTQAIPDRLL EWLESQPQRR LTMAQFMSWA LYDPESGYYS SRTGQFGDRG DFVTSPSLSA 
DFAELLAVQA AEFWQVLGRP DRFVWVEMGA GAGQFAGDFL AAIAGTELEA TLHYRIIERS
PQLRRQQQER LEPWRDRVDW WTWEDWATQP TVGVAFSNEL VDALPVHRIQ WQGGEWQEIY
VTENAGVLQE VLGPLSSPDL VDVFADLGLA AAIARLPEGY RTEVHPAAKQ WLAQVVQGLQ
RGYLLTIDYG YSGDRYYAAG RTDGTLQAYW QQRFHNDLYA RPGQQDLTAH VNFSALEVWG
EALGLKRLAF TEQALFLMAL GLGDRLMALS QPQSGSDLSQ LLRRREVLHR LLDPTALGNF
GVLLQGLNLS PEERAQSLRG FTVPASL