Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1090 |
Symbol | |
ID | 3775040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1107477 |
End bp | 1108274 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799516 |
Product | hypothetical protein |
Protein accession | YP_400107 |
Protein GI | 81299899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.879899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000796571 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTGACTT CCTGGCTTCC GAAACTCTGT GCTGCGATCG CGGCGCTTCT CTTCCTGCTC CCTGCCGCTC CCGCGCAGGC CTTTAATAAT CCTGAGCTCC TGCCTGATAG CCCCACCCCG ATCATCGACT TGGCTCGTGT GCTCACCGAC ACCCAAGAGC AACGACTAGC CCGAGAACTG AACCAGTTTG AAGATGAAAC CGGCTGGAAG CTGCGGGTGC TGACTCAGTT CGATCGCACA CCGGGGCTAG CCGTGCGTGA CTTCTGGAAT TTAGATGAGC GCAGCGTGCT GCTGATTGCA GATCAGCGGG GCGGTAACTT ACTGAACTTC AACGTCGGTG AAGCCTTCTA TGCCTTCATG CCGCGGACTT TCTGGGTTGA GTTACAAACG CGCTACGGCA ACCAGTTCTA CGTGCGCGAC CATGGCGAAG ACGGAGCAAT TTTTGATTCT CTTCATTCGA TTGAAGGCTG CCTGCGCCAG GGTGGCTGCA GTGTGGTGCC AGGGCTACCG CAAGAACAAT GGGTTCTAAC ACTGGTCACC TCCGTCCTCG GCGGTTTGGT TTGTGGATTC ACAGCACACC CCCGCAAGCC CGGTCAGATC ATCGCTTGGC AATGGGTGCT AATCTTCTCG CCGCTCTGGG GAATTTTGTT CATTGCCTTT GGCATTGGTC CAGTAATTAC TCGCACCACT GACTGGCTGC CGCTCTTTCG GAATGTCGCG GGCTTCTTAG TTGGAGCCTT GGGCGCTTAC TTGATCTATC AATTCCGCAG TTCGAATTCT TCTACGCCTG CTCAATAG
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Protein sequence | MLTSWLPKLC AAIAALLFLL PAAPAQAFNN PELLPDSPTP IIDLARVLTD TQEQRLAREL NQFEDETGWK LRVLTQFDRT PGLAVRDFWN LDERSVLLIA DQRGGNLLNF NVGEAFYAFM PRTFWVELQT RYGNQFYVRD HGEDGAIFDS LHSIEGCLRQ GGCSVVPGLP QEQWVLTLVT SVLGGLVCGF TAHPRKPGQI IAWQWVLIFS PLWGILFIAF GIGPVITRTT DWLPLFRNVA GFLVGALGAY LIYQFRSSNS STPAQ
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