Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1079 |
Symbol | |
ID | 3775028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1088698 |
End bp | 1091151 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799504 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_400096 |
Protein GI | 81299888 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.568332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00243484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGCGG CCAGCCCAGC TCCCGATTGG CGTCGCCTGC AACAAGCCTT GGCGATCGAG GCGGAGCAGG GCTTTGGCGA TTTGGTTGGG CGACAGGCTC GCTTCAGTGA ATTTCTCAGT CAAGCGTTGC AAGAGGCTGC CACCGCGATC GCAGATGAAC GCTGGCAGCA ATTGGCCCAA GCCTATCAAC GCTACGGCGA CCTGAGTGCC AGCCAGCGAC AACACCTCGT GGCTAATACA CGGCGTCAAA TTCATGAACA ACAGCGGCGC AGTCAAGCCC GCGTCAGTGA AAACTCGCCA CCAGTCCGGC GCTTACCCCG CAGTCAATCG CCCGTCGCAA CGACCACAGG TCAGATGGCG CTAGATCAGG CGCTGACCTA TCTCAAGGGT GTTGGGCCAC GCGTTGCTGC GCAACTAGAA CGGCTGGAGC TGCGCACCGT TCGCGATCTG CTCCATCACT ACCCTCGCAA CTACGTCGAT TACGCCCGCC AAGTCAATAT TCGCGCCCTT GAACCCGGCG AAACTGCTAC CTTGATCGGT GCGGTTCAGC GCTGTACCTG CTTCACCAGT CCGCGCAATG CCAAGCTGAC GATCTTGGAG CTGGTGGTGC GCGATGGCAG TGGTCAGCTC CGGCTCAGCC GCTTTTTCAT GGGAACTCGT TACAGTGGTC GCGGTTGGCA GGAACAACAG CGACGCCTTT ACCCACCGGG CACGATGATT GCGGCCTCGG GGTTAGTCAA ACGCAGCAAG TACGGCGTCA CCCTCGACAA CCCAGAGATC GAAGTTCTCG ACAGTCCTGA CAGCCCGATC GCCTCGCTCA AAGTTGGTCG AATTGTCCCG ATCTACCCGC TGACTGAGGG CGTTGCTGCC GACACCCTGC GCCGAGCGAT CGTCCAGGCG TTACCGGCTG CAGAGCAACT GCGGGATCCT TTGCCCACCG TGCTGCGCGA GCAACATCAG CTCTTGGTTC TGAATCAAGC GATCGCAGCC ATTCACTTCC CCGAAACGCC AGAACTTCTG CAACAGGCTC GCCGGCGACT GGTCTTTGAT GAATTTCTCT ACCTCCAGCT GGGCTTGTTG CAGCGACGAG CCCGACAACG AGCAGCGGCA GCAGCGGCGG TTTTGGCCCC AACTGGTGAG TTGATTGATC GCTTTTATCA ACTCCTGCCC TTTCAACTGA CGGGTGCACA ACAGCGCGTC GTCAACGACA TCCTGACGGA CCTGCAGCAA CCTTGGCCAA TGAATCGGCT CGTGCAAGGT GATGTCGGCT CAGGGAAAAC AGTGGTGGCG ATCGTCAGTC TGCTTGCGGC GATTCAAGCG GGCTACCAAG GCGCACTGAT GGCCCCAACC GAGGTCTTGG CCGAGCAGCA CTATCGCAAA CTGGTAGATT GGTGCACCCA ACTTCATCTG CCGGTGGAGT TATTGACGGG TTCTACACGG GCGGCAAAAC GGCGGGAAAT TCAGCGATCG CTCGCAACAG GTGAATTACC TTTGCTGGTT GGTACCCATG CTTTGATTCA GGATCCGGTT GACTTCCAGA ATCTTGGCCT CGTGGTAATT GATGAGCAGC ATCGGTTCGG CGTGGCACAG CGAGCAAAAT TGCAGCAAAA AGGCGTCAAC CCCCATGTGC TGACGATGAC AGCGACGCCA ATTCCGCGGA CCTTGGCACT AACTTTGCAT GGCGATTTGG AAGTTAGCCA AATTGATGAA TTACCGCCCG GTCGGCAACC GATTCAAACG ACTGCTCTAG GGCCGAGCGA TCGCCACCAT GCCCATGATT TGATGCGACG GGAAATTGCC CAAGGTCGTC AGGTTTACGT TGTCCTGCCG CTGGTTGAGG AGTCAGAAAA ACTCGATCTG CGATCGGCGA TCGAAGAATA TCAACGCCTC TCCCAAGTCT TTCCAGAATT CCAGATTGGC TTGCTGCACG GACGGATGAG CTCGGCGGAA AAAGATGCTG CGATCGCTGC TTTTCGCGAT CGCCAAACCG ACATATTGGT TTCAACAACT GTGGTCGAAG TCGGCGTTGA TGTCCCCAAT GCCACGGTCA TGCTAATTGA ACATGCTGAG CGATTTGGAC TCTCCCAGTT GCACCAATTG CGGGGTCGGG TCGGGCGTGG TGCTGCTCGT TCCTATTGCT TACTGATGAG TGCGTCGCGC AGCGAGACTG CACAACAGCG CCTTAAGGTG ATGGAGCAAT CCCAAGACGG CTTCTTCATT GCTGAAATGG ATTTGCGGCT ACGAGGACCT GGACAAGTCT TGGGCACACG CCAGTCTGGC CTACCGGATT TTGCCCTTGC TAGCCTAGTG GAAGATCAAG ATGTACTCGA TCTGGCTCGA ACTACGGCTG AGCAGTTGAT TGAGCAAGAT CCTGAGCTAA CGCGATCGCC TTTACTCAAA CAAGAACTCG AGGCTCGCTA CCGACGCTTG ATGGGTGGCA TGATTTTGAC CTAA
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Protein sequence | MTAASPAPDW RRLQQALAIE AEQGFGDLVG RQARFSEFLS QALQEAATAI ADERWQQLAQ AYQRYGDLSA SQRQHLVANT RRQIHEQQRR SQARVSENSP PVRRLPRSQS PVATTTGQMA LDQALTYLKG VGPRVAAQLE RLELRTVRDL LHHYPRNYVD YARQVNIRAL EPGETATLIG AVQRCTCFTS PRNAKLTILE LVVRDGSGQL RLSRFFMGTR YSGRGWQEQQ RRLYPPGTMI AASGLVKRSK YGVTLDNPEI EVLDSPDSPI ASLKVGRIVP IYPLTEGVAA DTLRRAIVQA LPAAEQLRDP LPTVLREQHQ LLVLNQAIAA IHFPETPELL QQARRRLVFD EFLYLQLGLL QRRARQRAAA AAAVLAPTGE LIDRFYQLLP FQLTGAQQRV VNDILTDLQQ PWPMNRLVQG DVGSGKTVVA IVSLLAAIQA GYQGALMAPT EVLAEQHYRK LVDWCTQLHL PVELLTGSTR AAKRREIQRS LATGELPLLV GTHALIQDPV DFQNLGLVVI DEQHRFGVAQ RAKLQQKGVN PHVLTMTATP IPRTLALTLH GDLEVSQIDE LPPGRQPIQT TALGPSDRHH AHDLMRREIA QGRQVYVVLP LVEESEKLDL RSAIEEYQRL SQVFPEFQIG LLHGRMSSAE KDAAIAAFRD RQTDILVSTT VVEVGVDVPN ATVMLIEHAE RFGLSQLHQL RGRVGRGAAR SYCLLMSASR SETAQQRLKV MEQSQDGFFI AEMDLRLRGP GQVLGTRQSG LPDFALASLV EDQDVLDLAR TTAEQLIEQD PELTRSPLLK QELEARYRRL MGGMILT
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