Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1060 |
Symbol | |
ID | 3773990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1070025 |
End bp | 1072052 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637799482 |
Product | type I restriction-modification |
Protein accession | YP_400077 |
Protein GI | 81299869 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000030221 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0378969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTG AATCCTCCCA ATCAACGACC GAAATCAGCA GTCTTCAAGC TGAGTTCCTC GGGGTGCTTC AAGCCCTCGG TGGCTCAGCG GGGAATAGCA AGCTGCAACA GTTGTTGGCG TGGGATGATG CTCGCTACGA GTCGGTCAAA GCAGAACTGA TGCTGCAAGG CCGGATTCAA TCAGGACGGG GACGCGGCGG GTCTGTGACG TTGATGGATA GTCAGGGAAT TGCGATCGCT ACGCCACCAG ACCTCCCAAT GGCCGCTCCT CTAGAACCGC AACCGACTGG ACGCCAGAAT CTCTCGGCCT TCATTTGGAG TGTGGCTGAC CTGCTGCGCG GCGACTACAA ACAGAGTGAC TACGGCAAAA TCATCCTGCC GTTTACGGTG CTGCGGCGCT TGGACTGTGT GCTTGCCCCG ACGAAAGCCG CTGTTCTTGA AGAGAAAGTC CTACGCGAAA GCCAAGGCTT AGCTCCAGAA CCGTTCTTGC TGAAGAAAGC AGGGCAGAAC TTCTGCAATA CCTCACCGCT CGATCTCAAG CAGCTGATGG GTGATGCCGA CAACATTGGC GAGAACCTGC GTGCTTATAT CCAAGGCTTC ACGCCAGCAG TGCGGGACAT TTTCGATAGC TTTGAGTTTC ATCTACAAAT CGATCGCCTC GAAAAAGCGG GTCTGCTTTA CCTTGTCACT GAACGCTTTG CGCAGATCGA CCTCCATCCC GATACGGTTA GCAATGCCGA GATGGGTTTG GTATTTGAGG AGCTGATTCG CAAATTTGCC GAACTCTCGA ATGAAACGGC TGGGGAACAC TTCACGCCCC GCGAAGTGAT TCGGCTGATG GTCAATTTGC TCTTTATTGA GGATGATGCC GCGCTGACTC AGCCTGGAAT TGTCCGCAGT CTGTATGACC CCACTGCAGG CACGGGCGGC ATGCTCAGTG TGGCCGAGGA ACATCTAACG GAGCTGAATC CTTCGGCGCG ATTGGTGCTG TCGGGGCAGG AATTGAACCC AGAGTCCTAT GCGATCTGCA AAGCCGACAT GCTGATCAAG GGACAAAACA TCCAGAATAT TTGCTTTGGC AACACGCTCT CCGATGACAA GTTGCCCGAT GCCAAGTACG ACTACATGCT GTCGAATCCT CCCTTCGGCG TCGAGTGGAA AAAGATTCAG AAGGAAGTCC AGCGAGAAGC TGAACAGTTG GGCTACAGCG GTCGTTTTGG TCCTGGCTTA CCTCGCGTCA GTGATGGCTC GTTGCTCTTT CTCCTGCATC TGATCTCGAA GATGCGACCT GCTAGTGAAG GCGGCAGCCG TCTGGGGATT GTGCTGAATG GATCACCGTT ATTTACCGGC GGGGCTGGGT CTGGCGAGAG CGAGATTCGC CGCTATGTCC TTGAAAACGA TCTGGTCGAG GCGATTATCG CTTTGCCCAC GGACATGTTC TACAACACAG GTATCAGCAC CTATATCTGG ATTCTGAGTA ACCGGAAGCC TGCAAGCCGC AAAGGCAAAG TTCAGCTAAT TGATGCCAGT GGTTTTTGGC AGAAGATGCG CAAGAGTTTG GGCAGTAAGC GCAAGGAACT GAGCGAGGAG CAGATTGCGG AGATTACGCG GTTGTTCGGC AACTTTGAGG AAGCCGATCG CGATGGGAAA CCCGTTAGCA AAATCTTTCG CAATGAAGAG TTTGGCTATC GCACGATTAC AGTGGAGCGT CCGCAGCGAG ATGAGGCGGG GAATGTCGTA CTGGCGCAGC GGGGCAAGAC TAAGGGGCAG CCTGTGGCGG ATGCCAGCTT ACGGGATACC GAGAATGTGC CGCTAACTGA GGATGTAGAC ACCTATTTCC AGCGAGAAGT GTTGCCGCAT GTGCCGGATG CTTGGATCGA CCCAGAGAAA ACCAAAGTCG GTTACGAGAT TCCCTTTAAC CGGCATTTTT ATGTGTTTAC GCCACCGCGA TCGCTGGAGG AAATTGATGC GGAGTTACAG CAAGTCACCG ATCGCATTCT GACAATGCTC GGGGGCTTAT CTCACTAA
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Protein sequence | MTFESSQSTT EISSLQAEFL GVLQALGGSA GNSKLQQLLA WDDARYESVK AELMLQGRIQ SGRGRGGSVT LMDSQGIAIA TPPDLPMAAP LEPQPTGRQN LSAFIWSVAD LLRGDYKQSD YGKIILPFTV LRRLDCVLAP TKAAVLEEKV LRESQGLAPE PFLLKKAGQN FCNTSPLDLK QLMGDADNIG ENLRAYIQGF TPAVRDIFDS FEFHLQIDRL EKAGLLYLVT ERFAQIDLHP DTVSNAEMGL VFEELIRKFA ELSNETAGEH FTPREVIRLM VNLLFIEDDA ALTQPGIVRS LYDPTAGTGG MLSVAEEHLT ELNPSARLVL SGQELNPESY AICKADMLIK GQNIQNICFG NTLSDDKLPD AKYDYMLSNP PFGVEWKKIQ KEVQREAEQL GYSGRFGPGL PRVSDGSLLF LLHLISKMRP ASEGGSRLGI VLNGSPLFTG GAGSGESEIR RYVLENDLVE AIIALPTDMF YNTGISTYIW ILSNRKPASR KGKVQLIDAS GFWQKMRKSL GSKRKELSEE QIAEITRLFG NFEEADRDGK PVSKIFRNEE FGYRTITVER PQRDEAGNVV LAQRGKTKGQ PVADASLRDT ENVPLTEDVD TYFQREVLPH VPDAWIDPEK TKVGYEIPFN RHFYVFTPPR SLEEIDAELQ QVTDRILTML GGLSH
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