| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1057 |
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| Symbol | |
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| ID | 3773987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1067527 |
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| End bp | 1068558 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637799479 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_400074 |
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| Protein GI | 81299866 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.004946 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0997928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG AGTCGAGCAT GGATTGGGTT GAAACCCGTT GCCACCGCAT TCTGGATGCC
AACCTCGATC GCGCCCGTGA AGGGTTGCGC ATTCTGGAAG AGTGGTGCCG CTTTGGCCTC
GAGCGCGCTG ACTTGAGCGC GACTTGCAAG GCGCTTCGGC AAGAAGTCGG CAGTTGGCAT
CGCCCAGAAT TTCGTCAAGC TCGCGACACA ACCCACGATC CCGGCACGAG CTTGAGTCAT
CCCCAAGAGC GACAGCGGAC TGACCTCAAT GCCGTTTTAT TGGCGAACTG TGCGCGGGTT
CAGGAAGCCC TGCGGGTGAT TGAGGAATAC GGCAAGCTGA TCGAGGGGGA TCTCAGCGAT
CGCGCTAAGG CAATGCGCTA CCAGATCTAT GTCTTGGAGT CTCAGCTGCA AAGTCGCGAT
CGCCTCAGTC GGTTGCGACA GGCACGGCTT TATCTTGTGA CCTCGCCCCA TCCTCGCTTG
CTGGAGGTCG TTGAAGCGGC TCTTTCGGCA GGGCTGAAAT TGGTGCAGTA CCGCGACAAG
CAGCAGGAGG ATGCAACCCG CCTAGAAACC GCCTGCCGCT TGGCGGAACT CTGCCAGCGC
TACGGAGCCC TTTTCCTCGT CAACGATCGC GTCGATCTAG CACTTGCTTG CGGGGCTGAT
GGCGTTCATC TTGGTCAGCA GGATGTGCCG ATGGACGTGG CTCGCCGCAT TCTCGGCCCC
GATCGCATTG TTGGGCGATC GACGACCAGT CCTGAAGAGT TGGCCCGTGC CAATGCTGAA
GGGGCGGACT ATGTCGGCGT GGGGCCCATC TTTGCCACAC CCACGAAACC CGGCAAAGCA
GCAGCGGGCT TTGACTATTT AGGCTATGCC CGCCAGCAGG CTCAGCAGCC GTTTTATGCG
ATTGGTGGAA TCGATGTCAG CAATGCCGCT GCGGTGGTTG CAGCCGGTGC CGATCGCCTC
GCCGTGGTCC GCGCGATCAT GGAGGCGCCC GACCCGAAGG CCGCTACGGC AGAACTTTTA
CAAATGCTTT AG
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| Protein sequence | MSSESSMDWV ETRCHRILDA NLDRAREGLR ILEEWCRFGL ERADLSATCK ALRQEVGSWH
RPEFRQARDT THDPGTSLSH PQERQRTDLN AVLLANCARV QEALRVIEEY GKLIEGDLSD
RAKAMRYQIY VLESQLQSRD RLSRLRQARL YLVTSPHPRL LEVVEAALSA GLKLVQYRDK
QQEDATRLET ACRLAELCQR YGALFLVNDR VDLALACGAD GVHLGQQDVP MDVARRILGP
DRIVGRSTTS PEELARANAE GADYVGVGPI FATPTKPGKA AAGFDYLGYA RQQAQQPFYA
IGGIDVSNAA AVVAAGADRL AVVRAIMEAP DPKAATAELL QML
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