Gene Synpcc7942_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1045 
Symbol 
ID3773975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1057543 
End bp1059114 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content58% 
IMG OID637799467 
Productamidase enhancer-like 
Protein accessionYP_400062 
Protein GI81299854 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.263222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC TTTGGGCTCT TCCCCTAGCG ATCGGGCTGG GACTTTTTCC GTCGGCACCG 
GTGACCCAAG CCCAAGCACC TCTCAACCCA ACATTACGAG TGGGAATTGT CCAGCGCTTT
GGTCGGCAGC CGAGCGATCG CCTGCAAATT GTGGCTGGTG CCCAGCGATC GCTGACGCTC
CGATTCACGG TCAATGGTCA ACCGCGTCAG TTTCGGGCCC AACGGCTGAC GGTGGCGATT
GCCCCTGTCC CCCTACCGAC CCCCGAGCAG CGATCGCAAT TAGTCATTAG TCAGCACCGC
AGCTTTGAGA GTGCTGAGGC CAGCGCCGCG CAATGGCGGG CCAAGGGGTT TGACGTCGAA
ATCGCCCAAC CGCAGGGCTG GGAAGTCTGG TTAAAACCGA CCCCAGACCT ACCTGATGCC
GCCCTACCGA GTTTGCTGCA ACGGTTGCGC AGTGAAGGAG CCGCGTCTGC TCTGCTACGC
AGCGAGACAC GCAAGACACA ACCGCAGTTG GTTTGGCAGC TAGGGGATCA ACGCTTTCAG
GGCGATCGCC TCGAGATTGA GAGCAATGGC CCGATCACCG TTGCTGGCAT TCCCTACCCG
GGTCAGCTCA CCCTGCAACC CAATGCCCAC GGCGACTTTA CCCTCGTCAA TACCGTCACA
GTTGAAGACT ATCTGAGTGG AGTCGTTCCC CACGAAATTG GTGCGGGTGC TCCTGCCCAA
GCGATCGCCG CCCAAGCGAT TCTGGCGCGG ACCTACGCTC TGCGCAATGT ACGGCGTTTC
CAAGTCGATA ACTATGAGCT CTGTGCCGAT GTGCAATGTC AGGTCTATCG CGGCTGGGAA
AGCCGGCTGC CGACAGTCGA GCAGGCAATT CGTCAAACGC GAGGCTTGGT GCTGAGCTAC
AACAACCAAC TCATTGATGC AGTCTATTCT TCGACAACTG GCGGGATAAC GGCTGGGTTT
GAAGATGCTT GGCTGGGCCA GCAGCGGTCC TATCTCCAGC CGCGCCTCGA TGCTCTGCGA
CCGCTCTGGA ATCTACAGAC GAAACCACTC AATCAAGAAG CGAATCTCAA GGCGTTTCTG
CAACTACGGG AGGGCTTTAA TGAGACTGGT CAGCCGCGCT TTCGGTGGCA GCGCCGTCGC
AGTCTGGCCG AGATTCAGGC AGAACTAAAA GCCTATCTCC GCGATCGCCG CGATCCAAGG
GCAGAGTTTC AGCAGATTCA ATCAGTAGCC GTGAGTCAGC GATCGCCAAG CGGTCGGGTC
TTAGAAGTAA TCGTTCAGAG CGATCGCGGG CCGATCGTCA TTGGTCGCGA TGAAGTCCGG
CGGGCCTTTG CGGGGCTATT CAGCACCTTG TTTTATCTCG AACCAGAGCA GGATGGCCAG
GGACGTCCTG TGGCCTACCG TTTTGTTGGT GGCGGCTTTG GCCATGGGGT TGGCCTCAGT
CAGACCGGGG CGATGGGCTT GGCACGCCAA GGCTGGAATT ACGATCGCAT CCTTAAGTTC
TACTATCCCC AAACGCAACT AGAGCCGCTC CATCCAACCA TGCTGCAGTC AGTCAACGCC
CGAAAGCCTT GA
 
Protein sequence
MLKLWALPLA IGLGLFPSAP VTQAQAPLNP TLRVGIVQRF GRQPSDRLQI VAGAQRSLTL 
RFTVNGQPRQ FRAQRLTVAI APVPLPTPEQ RSQLVISQHR SFESAEASAA QWRAKGFDVE
IAQPQGWEVW LKPTPDLPDA ALPSLLQRLR SEGAASALLR SETRKTQPQL VWQLGDQRFQ
GDRLEIESNG PITVAGIPYP GQLTLQPNAH GDFTLVNTVT VEDYLSGVVP HEIGAGAPAQ
AIAAQAILAR TYALRNVRRF QVDNYELCAD VQCQVYRGWE SRLPTVEQAI RQTRGLVLSY
NNQLIDAVYS STTGGITAGF EDAWLGQQRS YLQPRLDALR PLWNLQTKPL NQEANLKAFL
QLREGFNETG QPRFRWQRRR SLAEIQAELK AYLRDRRDPR AEFQQIQSVA VSQRSPSGRV
LEVIVQSDRG PIVIGRDEVR RAFAGLFSTL FYLEPEQDGQ GRPVAYRFVG GGFGHGVGLS
QTGAMGLARQ GWNYDRILKF YYPQTQLEPL HPTMLQSVNA RKP