Gene Synpcc7942_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1008 
SymbolpurU 
ID3773936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1020332 
End bp1021186 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content51% 
IMG OID637799428 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_400025 
Protein GI81299817 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.394277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CCACCGCTAC GCTGCTGATC TCCTGTCCTG ATCAGCAAGG TCTCGTCGCC 
CGCATTTCCA ATTTCATCTT TGCGAATGGT GGCAACATTA TTGACGCCGA CCAGCACACG
GATTTTGAGG CGGGGCTGTT CCTGAGTCGG ATTGAGTGGG AACTCACTGG ATTTAACCTC
GATCGCGAGT TAATTGGCCC TGCGTTTGAA GCGATCGCTC GCCCCTTGGG AGCGCAGTGG
CAATTGCATT TTTCCGATCG CAAACCACGG CTTAGTCTCT GGGTTAGCAA GCAGGATCAT
TGCCTCCTCG ACCTACTGTG GCGACAGCAA GCCGGAGAAC TGGATGCAGA AATTCCACTG
ATTATTAGCA ATCACGACAA ATTACGTCCG ATCGCTGAAC AATTTGGTAT TGATTTTCTT
CATTTGCCCA TTACTCGCGA GACGAAAGCA GAGCAGGAAG CTCGCCAGCT AGCAGCGATC
GCTGACTATG GGATTGATCT CGTGGTGCTC GCGAAATACA TGCAAGTTCT GAGTTCTGAG
TTCTTGGCTC AGTTTCCCCA AGTAATTAAT ATTCACCACT CCTTTTTGCC TGCTTTTGCC
GGTGCCAATC CTTACCAACG GGCCTATGAG CGAGGCGTCA AAATTATTGG AGCCACAGCT
CACTATGTAA CGCCCGATTT AGATGAAGGG CCAATTATTG AACAAGATGT AGTGCGGGTT
AGTCATCGTG ATGATGCTGA TGATCTCGTT CGTAAAGGCA AGGACTTGGA GCGGATCGTC
CTAGCGCGTG CGGTGCGTTT ACACCTGCAA CATCGGGTGC TGACTTACCG GAATCGCACC
GTTGTGTTTG CTTAA
 
Protein sequence
MKRATATLLI SCPDQQGLVA RISNFIFANG GNIIDADQHT DFEAGLFLSR IEWELTGFNL 
DRELIGPAFE AIARPLGAQW QLHFSDRKPR LSLWVSKQDH CLLDLLWRQQ AGELDAEIPL
IISNHDKLRP IAEQFGIDFL HLPITRETKA EQEARQLAAI ADYGIDLVVL AKYMQVLSSE
FLAQFPQVIN IHHSFLPAFA GANPYQRAYE RGVKIIGATA HYVTPDLDEG PIIEQDVVRV
SHRDDADDLV RKGKDLERIV LARAVRLHLQ HRVLTYRNRT VVFA