Gene Synpcc7942_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0987 
Symbol 
ID3775376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp996280 
End bp996723 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID637799406 
Productferric uptake regulator family protein 
Protein accessionYP_400004 
Protein GI81299796 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00388915 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTACA CAGCGGCCTC CCTCAAAGCG GAATTGAACG AGCGAGGCTG GCGATTGACG 
CCTCAGCGCG AAGAAATTCT GCGAGTCTTT CAAAATCTCC CAGCAGGTGA ACACCTCAGT
GCTGAGGACC TTTACAATCA TTTGCTGAGT CGCAATTCAC CCATCAGCCT CTCGACTATC
TATCGCACCC TGAAGCTAAT GGCTCGCATG GGTCTCCTGC GAGAGCTAGA TCTGGCCGAA
GATCACAAGC ACTACGAGCT CAATCAACCC CTGAAGCATC ACCATCACTT GATCTGCGTC
AGTTGCAGCA AGACGATTGA GTTCAAGAGC GATTCCGTGC TCAAAATTGG CGCCAAGACT
TCCGAGAAGG AGGGCTACCA CCTCTTGGAT TGTCAGCTCA CCATTCATGG CGTCTGCCCA
ACCTGTCAGC GATCGCTGGT TTAG
 
Protein sequence
MTYTAASLKA ELNERGWRLT PQREEILRVF QNLPAGEHLS AEDLYNHLLS RNSPISLSTI 
YRTLKLMARM GLLRELDLAE DHKHYELNQP LKHHHHLICV SCSKTIEFKS DSVLKIGAKT
SEKEGYHLLD CQLTIHGVCP TCQRSLV