Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0987 |
Symbol | |
ID | 3775376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 996280 |
End bp | 996723 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637799406 |
Product | ferric uptake regulator family protein |
Protein accession | YP_400004 |
Protein GI | 81299796 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00388915 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCTACA CAGCGGCCTC CCTCAAAGCG GAATTGAACG AGCGAGGCTG GCGATTGACG CCTCAGCGCG AAGAAATTCT GCGAGTCTTT CAAAATCTCC CAGCAGGTGA ACACCTCAGT GCTGAGGACC TTTACAATCA TTTGCTGAGT CGCAATTCAC CCATCAGCCT CTCGACTATC TATCGCACCC TGAAGCTAAT GGCTCGCATG GGTCTCCTGC GAGAGCTAGA TCTGGCCGAA GATCACAAGC ACTACGAGCT CAATCAACCC CTGAAGCATC ACCATCACTT GATCTGCGTC AGTTGCAGCA AGACGATTGA GTTCAAGAGC GATTCCGTGC TCAAAATTGG CGCCAAGACT TCCGAGAAGG AGGGCTACCA CCTCTTGGAT TGTCAGCTCA CCATTCATGG CGTCTGCCCA ACCTGTCAGC GATCGCTGGT TTAG
|
Protein sequence | MTYTAASLKA ELNERGWRLT PQREEILRVF QNLPAGEHLS AEDLYNHLLS RNSPISLSTI YRTLKLMARM GLLRELDLAE DHKHYELNQP LKHHHHLICV SCSKTIEFKS DSVLKIGAKT SEKEGYHLLD CQLTIHGVCP TCQRSLV
|
| |