Gene Synpcc7942_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0978 
Symbol 
ID3775366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp986415 
End bp987626 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content55% 
IMG OID637799397 
Productferredoxin-NADP oxidoreductase 
Protein accessionYP_399995 
Protein GI81299787 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000202848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0244193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATG CGAGTGTGGC TGGCGGAGCA GCTACCACCA CCTATGGCAA CCGGCTCTTT 
ATCTATGAAG TGATCGGTCT GCGCCAAGCC GAGGGCGAAC CGTCCGACAG CTCAATCCGC
CGTAGTGGCA GCACCTTCTT CAAGGTGCCT TACAGCCGGA TGAATCAAGA AATGCAACGG
ATTTTGCGCC TTGGCGGCAA AATCGTTAGC ATCCGGCCTG CGGAGGAAGC AGCCGCGAAT
AATGGTGCGG CTCCTCTACA GGCAGCAGCT GAAGAACCTG CTGCAGCACC AACCCCCGCT
CCGGCTGCCA AAAAACATTC AGCCGAAGAC GTGCCTGTCA ATATCTACCG GCCTAACAAG
CCTTTCGTAG GCAAGGTGCT CTCGAACGAG CCCTTGGTTC AAGAAGGCGG GATTGGTGTT
GTGCAGCACC TCACCTTCGA TATTTCGGAA GGCGATCTGC GCTACATCGA AGGTCAAAGT
ATCGGGATTA TCCCGGATGG CACCGATGAC AAAGGCAAGC CGCACAAGCT CCGTCTTTAC
TCGATCGCAT CCACTCGCCA CGGCGACCAC GTGGATGACA AAACCGTCTC GCTGTGCGTG
CGCCAGCTGC AGTACCAGAA CGAAGCCGGC GAAACGATTA ATGGCGTCTG CTCGACTTTC
CTCTGTGGTC TGAAGCCAGG CGATGACGTC AAGATCACCG GTCCTGTGGG CAAAGAAATG
CTCCTACCGG CGGACACAGA CGCCAACGTG ATCATGATGG GTACTGGCAC CGGGATTGCT
CCGTTCCGAG CCTACCTATG GCGGATGTTT AAAGACAACG AGCGAGCCAT CAACAGCGAG
TATCAATTCA ACGGCAAGGC TTGGTTGATC TTCGGGATTC CGACGACCGC CAACATCCTC
TACAAAGAGG AGCTGGAAGC GCTGCAGGCT CAGTATCCAG ATAACTTCCG CCTGACCTAC
GCGATCAGCC GCGAGCAGAA AAATGAAGCG GGCGGCCGGA TGTACATCCA AGACCGCGTC
GCTGAACATG CTGACGAGAT CTGGAACCTA CTCAAGGACG AAAAAACCCA CGTCTATATC
TGTGGTTTGC GTGGCATGGA AGATGGGATC GATCAAGCCA TGACCGTCGC AGCTGCCAAG
GAAGATGTGG TTTGGTCTGA CTACCAACGC ACCCTCAAGA AAGCGGGTCG TTGGCATGTT
GAAACCTACT AG
 
Protein sequence
MLNASVAGGA ATTTYGNRLF IYEVIGLRQA EGEPSDSSIR RSGSTFFKVP YSRMNQEMQR 
ILRLGGKIVS IRPAEEAAAN NGAAPLQAAA EEPAAAPTPA PAAKKHSAED VPVNIYRPNK
PFVGKVLSNE PLVQEGGIGV VQHLTFDISE GDLRYIEGQS IGIIPDGTDD KGKPHKLRLY
SIASTRHGDH VDDKTVSLCV RQLQYQNEAG ETINGVCSTF LCGLKPGDDV KITGPVGKEM
LLPADTDANV IMMGTGTGIA PFRAYLWRMF KDNERAINSE YQFNGKAWLI FGIPTTANIL
YKEELEALQA QYPDNFRLTY AISREQKNEA GGRMYIQDRV AEHADEIWNL LKDEKTHVYI
CGLRGMEDGI DQAMTVAAAK EDVVWSDYQR TLKKAGRWHV ETY