Gene Synpcc7942_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0959 
SymbolobgE 
ID3775347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp966530 
End bp967561 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content58% 
IMG OID637799378 
ProductGTPase ObgE 
Protein accessionYP_399976 
Protein GI81299768 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.513517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA TTGATCACGC CACAATCTGC GTCAAAGCAG GCGATGGAGG CGATGGCATT 
GTGGCATTCC GCCGAGAAAA ATATGTGCCG GCTGGCGGGC CTTCCGGCGG TAATGGTGGC
CGTGGCGGCT CTGTCATTTT AGTGGCGACA GAACAACTGC AAACCCTGCT TGATTTTCGC
TATCTCCGCC TCTTCAAAGC GCAGGATGGG GAGCGGGGCG GCCCAAAAGG CATGACTGGT
GCCAGTGCTG ACGACTTAAT CATTCAAGTG CCCTGTGGCA CAGCGGTGTA TGACGCCGAA
ACAGATGAGT GCCTCGGTGA TCTCACCAGT GCTGGCCAAA CTCTCCAAGT GGCGCAAGGT
GGCAAGGGCG GGTTGGGCAA CCAGCATTTT TTGAGCAACA GCAATCGCGC TCCTGAACAC
GCTCTGCCCG GATTGCCGGG GGAAGAACGG CAGCTGCGGC TGGAGCTGAA GTTGCTGGCG
GAAGTGGGAT TGATTGGCTT GCCCAACGCG GGTAAATCGA TGCTGATTTC CGTTCTCTCT
GCAGCTAAAC CCAAGATTGC CGATTACCCG TTTACAACGC TGGTACCCAA CTTGGGTGTG
GTGCGGCGGG AAACCGGCGA TGGCACCGTC TTTGCCGATA TTCCGGGCTT GATCGAAGGA
GCCCATCGGG GTGCCGGATT GGGGCATGAT TTCCTGCGCC ACATTGAGCG GACGCGCCTG
CTGATTCATC TCGTGGATCT GACCGCTGAA GATCCGATCG CTGACTGGCG AACGATTCAG
GCGGAACTGA AAGCCTACGG GCGCGGCTTG AGCGATCGCC CCCAGATTCT CGCTCTCAAT
AAAATCGACG CGGTACTTGA TGAGGATCTC AGCTTCTGGC AAGCCGAATT TCAAGCACTG
ACACCGGTGC CGCTGCTCTG CATTTCCAGT GCCGATCGCC GGGGCCTCGA TGCCTTGTTG
CGCCTGGTCT GGCAGTGGCT GGATGAACTG GATGCGGCGG CAGAGCTCAG TGAAACGCGG
GTTTTGAACT GA
 
Protein sequence
MQFIDHATIC VKAGDGGDGI VAFRREKYVP AGGPSGGNGG RGGSVILVAT EQLQTLLDFR 
YLRLFKAQDG ERGGPKGMTG ASADDLIIQV PCGTAVYDAE TDECLGDLTS AGQTLQVAQG
GKGGLGNQHF LSNSNRAPEH ALPGLPGEER QLRLELKLLA EVGLIGLPNA GKSMLISVLS
AAKPKIADYP FTTLVPNLGV VRRETGDGTV FADIPGLIEG AHRGAGLGHD FLRHIERTRL
LIHLVDLTAE DPIADWRTIQ AELKAYGRGL SDRPQILALN KIDAVLDEDL SFWQAEFQAL
TPVPLLCISS ADRRGLDALL RLVWQWLDEL DAAAELSETR VLN