Gene Synpcc7942_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0956 
Symbol 
ID3775344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp963926 
End bp965068 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID637799375 
Producthypothetical protein 
Protein accessionYP_399973 
Protein GI81299765 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.582353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG CCAGCTCTGC CGTCGCTAGC GCCCTCGATG CTCCCAAGCT CGGCCTGCCG 
GTCACAATCA TCACCGGTTT CTTGGGCAGT GGCAAAACTA CGCTGCTCAA CCATATTTTG
ACCAATCAAC AAGGGGTTAA AACAGCCGTT CTTGTCAATG AATTTGGCGA AATTGGCATT
GATAATGAGC TGATTGTGTC CACCAGCGAA GACATGGTGG AACTGAGCAA CGGTTGCATC
TGCTGCACCA TCAATAGCGA CTTGATGGAT GCGGTCTATC GGGTCTTGGA ACGCCCTGAA
AAAATCGACT ATCTCGTTGT CGAAACAACG GGTTTAGCCG ATCCCCTGCC CGTGGCGCTC
ACCTTCTTGG GTTCAGAGCT GAGAGATTTG ACCCGCCTCG ATTCCATCGT CACGGTTGTT
GATGCTGAGA ACTATAGTCT TGACCTCTTC AATAGCCAAG CAGCTTATAA TCAGCTGCTC
TACGGCGACA TCATCCTCTT GAATAAGTGT GACCTCGTGT CTGAATCGCG CTTGCAAGAG
CTAGAAGCAA AAATCCGTGA GATCAAAGCT GATGCACGGC TGTTGCGGAC AACGCAGGCG
CAAGTGCCCT TGCCGTTGAT TCTGAGCGTG GCGCTGTTTG AATCCGATCG CTACTTCGAT
AGTCGTGACC ACAGCGATTG TGACCATGAT CATGGGCATT GCACTCACGA AGCTCACGAT
CACCATGAGC ATAATCATCA CGATCATTCA GCCTGTGATC ATGACCACGG CCATTGCGAG
CATGATCATG ACCACCACCA TGAGCATGCT GCCAATCACC TAGAAATTGA TGGCTTTACC
TCGCTCTCCT TCCAGAGCGA TCGCCCCTTC GCGATTCGGA AATTGCAGCA TTTTCTCGAC
AATCAATTAC CGACCAGCGT TTTTCGAGCC AAAGGAATTC TTTGGTTTGA TGAGAGTGCC
AAACGTCATA TTTTCCATCT GAGTGGCAAG CGCTTCAGCA TTGATGACAG TGAGTGGACT
GGGCCAAAGC GCAATCAATT AGTGTTGATT GGCCAAGGTC TTGATCATGC CGAATTGCAA
CAGCAACTTG AAGCATGTCT GACGCTACCG AGTACGACTC GGGGCAAGGG CTTTGGTCGC
TAA
 
Protein sequence
MTVASSAVAS ALDAPKLGLP VTIITGFLGS GKTTLLNHIL TNQQGVKTAV LVNEFGEIGI 
DNELIVSTSE DMVELSNGCI CCTINSDLMD AVYRVLERPE KIDYLVVETT GLADPLPVAL
TFLGSELRDL TRLDSIVTVV DAENYSLDLF NSQAAYNQLL YGDIILLNKC DLVSESRLQE
LEAKIREIKA DARLLRTTQA QVPLPLILSV ALFESDRYFD SRDHSDCDHD HGHCTHEAHD
HHEHNHHDHS ACDHDHGHCE HDHDHHHEHA ANHLEIDGFT SLSFQSDRPF AIRKLQHFLD
NQLPTSVFRA KGILWFDESA KRHIFHLSGK RFSIDDSEWT GPKRNQLVLI GQGLDHAELQ
QQLEACLTLP STTRGKGFGR